dbCAN Logo

Cluster: Rep_1158_CGC11

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC Rep_1158_c_3 Rep_1158_c_3_46 48783 50681 - 4.A.1.2.12
CAZyme Rep_1158_c_3 Rep_1158_c_3_47 50873 52330 + GH32
TF Rep_1158_c_3 Rep_1158_c_3_48 52311 53276 + LacI
pfam Rep_1158_c_3 Rep_1158_c_3_49 53336 54172 - Hydrolase | S6PP | Hydrolase_3
TC Rep_1158_c_3 Rep_1158_c_3_50 54315 55238 - 3.A.1.5.25
TC Rep_1158_c_3 Rep_1158_c_3_51 55249 56316 - 3.A.1.5.25
pfam Rep_1158_c_3 Rep_1158_c_3_52 56325 57251 - BPD_transp_1 | OppC_N
TC Rep_1158_c_3 Rep_1158_c_3_53 57251 58747 - 3.A.1.5.32
TC Rep_1158_c_3 Rep_1158_c_3_54 59121 61100 - 3.A.1.5.25
TC Rep_1158_c_3 Rep_1158_c_3_55 61297 63273 - 3.A.1.5.19
Gene ID: Rep_1158_c_3_46
Type: TC
Location: 48783 - 50681 (-)
Gene ID: Rep_1158_c_3_47
Type: CAZyme
Location: 50873 - 52330 (+)
Gene ID: Rep_1158_c_3_48
Type: TF
Location: 52311 - 53276 (+)
Gene ID: Rep_1158_c_3_49
Type: pfam
Location: 53336 - 54172 (-)
Gene ID: Rep_1158_c_3_50
Type: TC
Location: 54315 - 55238 (-)
Gene ID: Rep_1158_c_3_51
Type: TC
Location: 55249 - 56316 (-)
Gene ID: Rep_1158_c_3_52
Type: pfam
Location: 56325 - 57251 (-)
Gene ID: Rep_1158_c_3_53
Type: TC
Location: 57251 - 58747 (-)
Gene ID: Rep_1158_c_3_54
Type: TC
Location: 59121 - 61100 (-)
Gene ID: Rep_1158_c_3_55
Type: TC
Location: 61297 - 63273 (-)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

Loading chart...

No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

← Back to Cluster List