Cluster: Rep_1157_CGC9
🧬 Cluster Details
- Gene Count: 6
- CAZyme Count: 1
- Substrate:
- Genome ID: Rep_1157
- CGC Family ID: CGCFAM_11020
- Continent: NA
- Source Study: Leviatan et al., 2022 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | Rep_1157_c_6 | Rep_1157_c_6_32 | 35247 | 37145 | - | 4.A.1.2.12 |
| CAZyme | Rep_1157_c_6 | Rep_1157_c_6_33 | 37337 | 38791 | + | GH32 |
| TF | Rep_1157_c_6 | Rep_1157_c_6_34 | 38772 | 39737 | + | LacI |
| pfam | Rep_1157_c_6 | Rep_1157_c_6_35 | 39822 | 40640 | - | Hydrolase | S6PP | Hydrolase_3 |
| TC | Rep_1157_c_6 | Rep_1157_c_6_36 | 40826 | 41749 | - | 3.A.1.5.25 |
| TC | Rep_1157_c_6 | Rep_1157_c_6_37 | 41760 | 42527 | - | 3.A.1.5.19 |
Gene ID: Rep_1157_c_6_32
Type: TC
Location: 35247 - 37145 (-)
Type: TC
Location: 35247 - 37145 (-)
Gene ID: Rep_1157_c_6_33
Type: CAZyme
Location: 37337 - 38791 (+)
Type: CAZyme
Location: 37337 - 38791 (+)
Gene ID: Rep_1157_c_6_34
Type: TF
Location: 38772 - 39737 (+)
Type: TF
Location: 38772 - 39737 (+)
Gene ID: Rep_1157_c_6_35
Type: pfam
Location: 39822 - 40640 (-)
Type: pfam
Location: 39822 - 40640 (-)
Gene ID: Rep_1157_c_6_36
Type: TC
Location: 40826 - 41749 (-)
Type: TC
Location: 40826 - 41749 (-)
Gene ID: Rep_1157_c_6_37
Type: TC
Location: 41760 - 42527 (-)
Type: TC
Location: 41760 - 42527 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota
Class
Bacilli
Order
Lactobacillales
Family
Streptococcaceae
Genus
Streptococcus
Species
Streptococcus constellatus
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.