Cluster: Rep_1157_CGC4
🧬 Cluster Details
- Gene Count: 8
- CAZyme Count: 3
- Substrate: alpha-glucan
- Genome ID: Rep_1157
- CGC Family ID: CGCFAM_00010
- Continent: NA
- Source Study: Leviatan et al., 2022 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | Rep_1157_c_2 | Rep_1157_c_2_1 | 150 | 890 | - | CBM68 |
| TF | Rep_1157_c_2 | Rep_1157_c_2_2 | 904 | 1890 | - | LacI |
| NULL(UNKNOWN) | Rep_1157_c_2 | Rep_1157_c_2_3 | 1901 | 2713 | - |
NULL(UNKNOWN)
[View Structural Homologs] |
| TC | Rep_1157_c_2 | Rep_1157_c_2_4 | 2811 | 3653 | - | 3.A.1.1.26 |
| TC | Rep_1157_c_2 | Rep_1157_c_2_5 | 3655 | 4950 | - | 3.A.1.1.26 |
| TC | Rep_1157_c_2 | Rep_1157_c_2_6 | 5024 | 6286 | - | 3.A.1.1.26 |
| CAZyme | Rep_1157_c_2 | Rep_1157_c_2_7 | 6614 | 8137 | + | GH77 |
| CAZyme | Rep_1157_c_2 | Rep_1157_c_2_8 | 8165 | 10426 | + | GT35 |
Gene ID: Rep_1157_c_2_1
Type: CAZyme
Location: 150 - 890 (-)
Type: CAZyme
Location: 150 - 890 (-)
Gene ID: Rep_1157_c_2_2
Type: TF
Location: 904 - 1890 (-)
Type: TF
Location: 904 - 1890 (-)
Gene ID: Rep_1157_c_2_3
Type:
Location: 1901 - 2713 (-)
Type:
Location: 1901 - 2713 (-)
Gene ID: Rep_1157_c_2_4
Type: TC
Location: 2811 - 3653 (-)
Type: TC
Location: 2811 - 3653 (-)
Gene ID: Rep_1157_c_2_5
Type: TC
Location: 3655 - 4950 (-)
Type: TC
Location: 3655 - 4950 (-)
Gene ID: Rep_1157_c_2_6
Type: TC
Location: 5024 - 6286 (-)
Type: TC
Location: 5024 - 6286 (-)
Gene ID: Rep_1157_c_2_7
Type: CAZyme
Location: 6614 - 8137 (+)
Type: CAZyme
Location: 6614 - 8137 (+)
Gene ID: Rep_1157_c_2_8
Type: CAZyme
Location: 8165 - 10426 (+)
Type: CAZyme
Location: 8165 - 10426 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota
Class
Bacilli
Order
Lactobacillales
Family
Streptococcaceae
Genus
Streptococcus
Species
Streptococcus constellatus
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.