Cluster: Rep_1157_CGC3
🧬 Cluster Details
- Gene Count: 7
- CAZyme Count: 2
- Substrate:
- Genome ID: Rep_1157
- Continent: NA
- Source Study: Leviatan et al., 2022 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | Rep_1157_c_1 | Rep_1157_c_1_19 | 14136 | 14489 | + | GH4 |
| pfam | Rep_1157_c_1 | Rep_1157_c_1_20 | 14535 | 15209 | + | Glyco_hydro_4C |
| NULL(UNKNOWN) | Rep_1157_c_1 | Rep_1157_c_1_21 | 15209 | 15457 | + |
NULL(UNKNOWN)
[View Structural Homologs] |
| TC | Rep_1157_c_1 | Rep_1157_c_1_22 | 15767 | 16327 | + | 3.A.1.30.2 |
| TC | Rep_1157_c_1 | Rep_1157_c_1_23 | 16329 | 17663 | + | 3.A.1.30.2 |
| TC | Rep_1157_c_1 | Rep_1157_c_1_24 | 17660 | 18313 | + | 3.A.1.30.2 |
| CAZyme | Rep_1157_c_1 | Rep_1157_c_1_25 | 18382 | 19989 | - | GH13_31 |
Gene ID: Rep_1157_c_1_19
Type: CAZyme
Location: 14136 - 14489 (+)
Type: CAZyme
Location: 14136 - 14489 (+)
Gene ID: Rep_1157_c_1_20
Type: pfam
Location: 14535 - 15209 (+)
Type: pfam
Location: 14535 - 15209 (+)
Gene ID: Rep_1157_c_1_21
Type:
Location: 15209 - 15457 (+)
Type:
Location: 15209 - 15457 (+)
Gene ID: Rep_1157_c_1_22
Type: TC
Location: 15767 - 16327 (+)
Type: TC
Location: 15767 - 16327 (+)
Gene ID: Rep_1157_c_1_23
Type: TC
Location: 16329 - 17663 (+)
Type: TC
Location: 16329 - 17663 (+)
Gene ID: Rep_1157_c_1_24
Type: TC
Location: 17660 - 18313 (+)
Type: TC
Location: 17660 - 18313 (+)
Gene ID: Rep_1157_c_1_25
Type: CAZyme
Location: 18382 - 19989 (-)
Type: CAZyme
Location: 18382 - 19989 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota
Class
Bacilli
Order
Lactobacillales
Family
Streptococcaceae
Genus
Streptococcus
Species
Streptococcus constellatus
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.