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Cluster: Rep_1157_CGC16

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
CAZyme Rep_1157_c_48 Rep_1157_c_48_4 3047 4477 + GT5
CAZyme Rep_1157_c_48 Rep_1157_c_48_5 4502 6901 + GT35
pfam Rep_1157_c_48 Rep_1157_c_48_6 7215 7415 + ATP-synt_C
TC Rep_1157_c_48 Rep_1157_c_48_7 7455 8168 + 3.A.2.1.2
pfam Rep_1157_c_48 Rep_1157_c_48_8 8183 8677 + ATP-synt_B
pfam Rep_1157_c_48 Rep_1157_c_48_9 8677 9213 + OSCP
TC Rep_1157_c_48 Rep_1157_c_48_10 9229 10734 + 3.A.2.1.2
TC Rep_1157_c_48 Rep_1157_c_48_11 10750 11628 + 3.A.2.1.1
TC Rep_1157_c_48 Rep_1157_c_48_12 11663 12511 + 3.A.2.1.5
Gene ID: Rep_1157_c_48_4
Type: CAZyme
Location: 3047 - 4477 (+)
Gene ID: Rep_1157_c_48_5
Type: CAZyme
Location: 4502 - 6901 (+)
Gene ID: Rep_1157_c_48_6
Type: pfam
Location: 7215 - 7415 (+)
Gene ID: Rep_1157_c_48_7
Type: TC
Location: 7455 - 8168 (+)
Gene ID: Rep_1157_c_48_8
Type: pfam
Location: 8183 - 8677 (+)
Gene ID: Rep_1157_c_48_9
Type: pfam
Location: 8677 - 9213 (+)
Gene ID: Rep_1157_c_48_10
Type: TC
Location: 9229 - 10734 (+)
Gene ID: Rep_1157_c_48_11
Type: TC
Location: 10750 - 11628 (+)
Gene ID: Rep_1157_c_48_12
Type: TC
Location: 11663 - 12511 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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