dbCAN Logo

Cluster: Rep_1157_CGC10

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC Rep_1157_c_9 Rep_1157_c_9_12 10165 10878 + 1.A.8.2.6
TF Rep_1157_c_9 Rep_1157_c_9_13 11179 11895 - GntR
CAZyme Rep_1157_c_9 Rep_1157_c_9_14 12067 13854 + GH35
TC Rep_1157_c_9 Rep_1157_c_9_15 13851 14327 + 4.A.6.1.18
TC Rep_1157_c_9 Rep_1157_c_9_16 14346 15239 + 4.A.6.1.18
TC Rep_1157_c_9 Rep_1157_c_9_17 15226 16053 + 4.A.6.1.18
TC Rep_1157_c_9 Rep_1157_c_9_18 16071 16475 + 4.A.6.1.18
Gene ID: Rep_1157_c_9_12
Type: TC
Location: 10165 - 10878 (+)
Gene ID: Rep_1157_c_9_13
Type: TF
Location: 11179 - 11895 (-)
Gene ID: Rep_1157_c_9_14
Type: CAZyme
Location: 12067 - 13854 (+)
Gene ID: Rep_1157_c_9_15
Type: TC
Location: 13851 - 14327 (+)
Gene ID: Rep_1157_c_9_16
Type: TC
Location: 14346 - 15239 (+)
Gene ID: Rep_1157_c_9_17
Type: TC
Location: 15226 - 16053 (+)
Gene ID: Rep_1157_c_9_18
Type: TC
Location: 16071 - 16475 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

Loading chart...

No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

← Back to Cluster List