Cluster: Rep_1153_CGC5
🧬 Cluster Details
- Gene Count: 19
- CAZyme Count: 6
- Substrate:
- Genome ID: Rep_1153
- CGC Family ID: CGCFAM_00402
- Continent: NA
- Source Study: Leviatan et al., 2022 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | Rep_1153_c_3 | Rep_1153_c_3_1 | 3 | 6176 | - | GH20 | GH84 |
| CAZyme | Rep_1153_c_3 | Rep_1153_c_3_2 | 6317 | 12736 | - | GH101 |
| TC | Rep_1153_c_3 | Rep_1153_c_3_3 | 13005 | 14987 | - | 3.A.1.5.25 |
| CAZyme | Rep_1153_c_3 | Rep_1153_c_3_4 | 15295 | 16347 | - | GT113 |
| STP | Rep_1153_c_3 | Rep_1153_c_3_5 | 16372 | 17469 | - | Pyr_redox |
| NULL(UNKNOWN) | Rep_1153_c_3 | Rep_1153_c_3_6 | 17603 | 18751 | - |
NULL(UNKNOWN)
[View Structural Homologs] |
| TC | Rep_1153_c_3 | Rep_1153_c_3_7 | 18931 | 20346 | - | 2.A.66.2.16 |
| CAZyme | Rep_1153_c_3 | Rep_1153_c_3_8 | 20353 | 21318 | - | GT2 |
| pfam | Rep_1153_c_3 | Rep_1153_c_3_9 | 21318 | 22412 | - | Epimerase_2 |
| CAZyme | Rep_1153_c_3 | Rep_1153_c_3_10 | 22409 | 23494 | - | GT4 |
| CAZyme | Rep_1153_c_3 | Rep_1153_c_3_11 | 23469 | 24209 | - | GT26 |
| pfam | Rep_1153_c_3 | Rep_1153_c_3_12 | 24211 | 24996 | - | LicD |
| TC | Rep_1153_c_3 | Rep_1153_c_3_13 | 25001 | 26368 | - | 9.B.18.1.2 |
| TC | Rep_1153_c_3 | Rep_1153_c_3_14 | 26391 | 27074 | - | 8.A.3.2.2 |
| TC | Rep_1153_c_3 | Rep_1153_c_3_15 | 27084 | 27776 | - | 8.A.3.2.3 |
| pfam | Rep_1153_c_3 | Rep_1153_c_3_16 | 27785 | 28516 | - | CpsB_CapC |
| pfam | Rep_1153_c_3 | Rep_1153_c_3_17 | 28518 | 29963 | - | DNA_PPF | LytR_cpsA_psr |
| TC | Rep_1153_c_3 | Rep_1153_c_3_18 | 30155 | 32116 | - | 3.A.1.5.19 |
| TC | Rep_1153_c_3 | Rep_1153_c_3_19 | 32265 | 34076 | - | 3.A.1.5.25 |
Gene ID: Rep_1153_c_3_1
Type: CAZyme
Location: 3 - 6176 (-)
Type: CAZyme
Location: 3 - 6176 (-)
Gene ID: Rep_1153_c_3_2
Type: CAZyme
Location: 6317 - 12736 (-)
Type: CAZyme
Location: 6317 - 12736 (-)
Gene ID: Rep_1153_c_3_3
Type: TC
Location: 13005 - 14987 (-)
Type: TC
Location: 13005 - 14987 (-)
Gene ID: Rep_1153_c_3_4
Type: CAZyme
Location: 15295 - 16347 (-)
Type: CAZyme
Location: 15295 - 16347 (-)
Gene ID: Rep_1153_c_3_5
Type: STP
Location: 16372 - 17469 (-)
Type: STP
Location: 16372 - 17469 (-)
Gene ID: Rep_1153_c_3_6
Type:
Location: 17603 - 18751 (-)
Type:
Location: 17603 - 18751 (-)
Gene ID: Rep_1153_c_3_7
Type: TC
Location: 18931 - 20346 (-)
Type: TC
Location: 18931 - 20346 (-)
Gene ID: Rep_1153_c_3_8
Type: CAZyme
Location: 20353 - 21318 (-)
Type: CAZyme
Location: 20353 - 21318 (-)
Gene ID: Rep_1153_c_3_9
Type: pfam
Location: 21318 - 22412 (-)
Type: pfam
Location: 21318 - 22412 (-)
Gene ID: Rep_1153_c_3_10
Type: CAZyme
Location: 22409 - 23494 (-)
Type: CAZyme
Location: 22409 - 23494 (-)
Gene ID: Rep_1153_c_3_11
Type: CAZyme
Location: 23469 - 24209 (-)
Type: CAZyme
Location: 23469 - 24209 (-)
Gene ID: Rep_1153_c_3_12
Type: pfam
Location: 24211 - 24996 (-)
Type: pfam
Location: 24211 - 24996 (-)
Gene ID: Rep_1153_c_3_13
Type: TC
Location: 25001 - 26368 (-)
Type: TC
Location: 25001 - 26368 (-)
Gene ID: Rep_1153_c_3_14
Type: TC
Location: 26391 - 27074 (-)
Type: TC
Location: 26391 - 27074 (-)
Gene ID: Rep_1153_c_3_15
Type: TC
Location: 27084 - 27776 (-)
Type: TC
Location: 27084 - 27776 (-)
Gene ID: Rep_1153_c_3_16
Type: pfam
Location: 27785 - 28516 (-)
Type: pfam
Location: 27785 - 28516 (-)
Gene ID: Rep_1153_c_3_17
Type: pfam
Location: 28518 - 29963 (-)
Type: pfam
Location: 28518 - 29963 (-)
Gene ID: Rep_1153_c_3_18
Type: TC
Location: 30155 - 32116 (-)
Type: TC
Location: 30155 - 32116 (-)
Gene ID: Rep_1153_c_3_19
Type: TC
Location: 32265 - 34076 (-)
Type: TC
Location: 32265 - 34076 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota
Class
Bacilli
Order
Lactobacillales
Family
Streptococcaceae
Genus
Streptococcus
Species
Streptococcus sp900550895
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.