Cluster: Rep_1153_CGC12
🧬 Cluster Details
- Gene Count: 5
- CAZyme Count: 1
- Substrate:
- Genome ID: Rep_1153
- CGC Family ID: CGCFAM_00401
- Continent: NA
- Source Study: Leviatan et al., 2022 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | Rep_1153_c_75 | Rep_1153_c_75_1 | 124 | 963 | - | 3.A.1.1.34 |
| TC | Rep_1153_c_75 | Rep_1153_c_75_2 | 979 | 1866 | - | 3.A.1.1.20 |
| STP | Rep_1153_c_75 | Rep_1153_c_75_3 | 2064 | 3392 | - | SBP_bac_1 |
| pfam | Rep_1153_c_75 | Rep_1153_c_75_4 | 3506 | 4204 | - | NanE |
| CAZyme | Rep_1153_c_75 | Rep_1153_c_75_5 | 4438 | 7719 | - | CBM40 | GH33 |
Gene ID: Rep_1153_c_75_1
Type: TC
Location: 124 - 963 (-)
Type: TC
Location: 124 - 963 (-)
Gene ID: Rep_1153_c_75_2
Type: TC
Location: 979 - 1866 (-)
Type: TC
Location: 979 - 1866 (-)
Gene ID: Rep_1153_c_75_3
Type: STP
Location: 2064 - 3392 (-)
Type: STP
Location: 2064 - 3392 (-)
Gene ID: Rep_1153_c_75_4
Type: pfam
Location: 3506 - 4204 (-)
Type: pfam
Location: 3506 - 4204 (-)
Gene ID: Rep_1153_c_75_5
Type: CAZyme
Location: 4438 - 7719 (-)
Type: CAZyme
Location: 4438 - 7719 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota
Class
Bacilli
Order
Lactobacillales
Family
Streptococcaceae
Genus
Streptococcus
Species
Streptococcus sp900550895
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.