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Cluster: Rep_1151_CGC8

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
CAZyme Rep_1151_c_37 Rep_1151_c_37_3 4707 6587 - GH20
pfam Rep_1151_c_37 Rep_1151_c_37_4 6581 7450 - ROK
CAZyme Rep_1151_c_37 Rep_1151_c_37_5 7550 10195 - GH38
CAZyme Rep_1151_c_37 Rep_1151_c_37_6 10250 11530 - GH125
CAZyme Rep_1151_c_37 Rep_1151_c_37_7 11701 13788 + GH92
CAZyme Rep_1151_c_37 Rep_1151_c_37_8 13825 15504 - GH29
TC Rep_1151_c_37 Rep_1151_c_37_9 16034 17536 - 3.A.1.15.3
TC Rep_1151_c_37 Rep_1151_c_37_10 17546 18352 - 3.A.1.15.3
TC Rep_1151_c_37 Rep_1151_c_37_11 18345 19049 - 3.A.1.15.3
Gene ID: Rep_1151_c_37_3
Type: CAZyme
Location: 4707 - 6587 (-)
Gene ID: Rep_1151_c_37_4
Type: pfam
Location: 6581 - 7450 (-)
Gene ID: Rep_1151_c_37_5
Type: CAZyme
Location: 7550 - 10195 (-)
Gene ID: Rep_1151_c_37_6
Type: CAZyme
Location: 10250 - 11530 (-)
Gene ID: Rep_1151_c_37_7
Type: CAZyme
Location: 11701 - 13788 (+)
Gene ID: Rep_1151_c_37_8
Type: CAZyme
Location: 13825 - 15504 (-)
Gene ID: Rep_1151_c_37_9
Type: TC
Location: 16034 - 17536 (-)
Gene ID: Rep_1151_c_37_10
Type: TC
Location: 17546 - 18352 (-)
Gene ID: Rep_1151_c_37_11
Type: TC
Location: 18345 - 19049 (-)

Taxonomic Lineage

Domain
Bacteria
→
Phylum
Bacillota
→
Class
Bacilli
→
Order
Lactobacillales
→
Family
Streptococcaceae
→
Genus
Streptococcus
→

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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