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Cluster: Rep_1151_CGC6

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
CAZyme Rep_1151_c_28 Rep_1151_c_28_2 450 1196 - GT111
TC Rep_1151_c_28 Rep_1151_c_28_3 1243 2610 - 9.B.18.1.2
TC Rep_1151_c_28 Rep_1151_c_28_4 2633 3316 - 8.A.3.2.2
TC Rep_1151_c_28 Rep_1151_c_28_5 3326 4018 - 8.A.3.2.3
pfam Rep_1151_c_28 Rep_1151_c_28_6 4027 4758 - CpsB_CapC
pfam Rep_1151_c_28 Rep_1151_c_28_7 4760 6205 - DNA_PPF | LytR_cpsA_psr
TC Rep_1151_c_28 Rep_1151_c_28_8 6389 8347 - 3.A.1.5.19
TC Rep_1151_c_28 Rep_1151_c_28_9 8506 10473 - 3.A.1.5.25
CAZyme Rep_1151_c_28 Rep_1151_c_28_10 10642 12252 - GH13_31
Gene ID: Rep_1151_c_28_2
Type: CAZyme
Location: 450 - 1196 (-)
Gene ID: Rep_1151_c_28_3
Type: TC
Location: 1243 - 2610 (-)
Gene ID: Rep_1151_c_28_4
Type: TC
Location: 2633 - 3316 (-)
Gene ID: Rep_1151_c_28_5
Type: TC
Location: 3326 - 4018 (-)
Gene ID: Rep_1151_c_28_6
Type: pfam
Location: 4027 - 4758 (-)
Gene ID: Rep_1151_c_28_7
Type: pfam
Location: 4760 - 6205 (-)
Gene ID: Rep_1151_c_28_8
Type: TC
Location: 6389 - 8347 (-)
Gene ID: Rep_1151_c_28_9
Type: TC
Location: 8506 - 10473 (-)
Gene ID: Rep_1151_c_28_10
Type: CAZyme
Location: 10642 - 12252 (-)

Taxonomic Lineage

Domain
Bacteria
→
Phylum
Bacillota
→
Class
Bacilli
→
Order
Lactobacillales
→
Family
Streptococcaceae
→
Genus
Streptococcus
→

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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