Cluster: Rep_1151_CGC3
🧬 Cluster Details
- Gene Count: 7
- CAZyme Count: 2
- Substrate:
- Genome ID: Rep_1151
- Continent: NA
- Source Study: Leviatan et al., 2022 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | Rep_1151_c_16 | Rep_1151_c_16_2 | 1448 | 5479 | - | GH20 | GH20 |
| TF | Rep_1151_c_16 | Rep_1151_c_16_3 | 5774 | 6490 | - | GntR |
| CAZyme | Rep_1151_c_16 | Rep_1151_c_16_4 | 6813 | 8600 | + | GH35 |
| TC | Rep_1151_c_16 | Rep_1151_c_16_5 | 8597 | 9073 | + | 4.A.6.1.18 |
| TC | Rep_1151_c_16 | Rep_1151_c_16_6 | 9100 | 10005 | + | 4.A.6.1.18 |
| TC | Rep_1151_c_16 | Rep_1151_c_16_7 | 9992 | 10813 | + | 4.A.6.1.18 |
| TC | Rep_1151_c_16 | Rep_1151_c_16_8 | 10817 | 11221 | + | 4.A.6.1.18 |
Gene ID: Rep_1151_c_16_2
Type: CAZyme
Location: 1448 - 5479 (-)
Type: CAZyme
Location: 1448 - 5479 (-)
Gene ID: Rep_1151_c_16_3
Type: TF
Location: 5774 - 6490 (-)
Type: TF
Location: 5774 - 6490 (-)
Gene ID: Rep_1151_c_16_4
Type: CAZyme
Location: 6813 - 8600 (+)
Type: CAZyme
Location: 6813 - 8600 (+)
Gene ID: Rep_1151_c_16_5
Type: TC
Location: 8597 - 9073 (+)
Type: TC
Location: 8597 - 9073 (+)
Gene ID: Rep_1151_c_16_6
Type: TC
Location: 9100 - 10005 (+)
Type: TC
Location: 9100 - 10005 (+)
Gene ID: Rep_1151_c_16_7
Type: TC
Location: 9992 - 10813 (+)
Type: TC
Location: 9992 - 10813 (+)
Gene ID: Rep_1151_c_16_8
Type: TC
Location: 10817 - 11221 (+)
Type: TC
Location: 10817 - 11221 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota
Class
Bacilli
Order
Lactobacillales
Family
Streptococcaceae
Genus
Streptococcus
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.