dbCAN Logo

Cluster: Rep_1151_CGC14

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC Rep_1151_c_79 Rep_1151_c_79_39 33176 34333 + 3.A.1.11.7
TC Rep_1151_c_79 Rep_1151_c_79_40 34314 35120 + 3.A.1.11.7
TC Rep_1151_c_79 Rep_1151_c_79_41 35117 35890 + 3.A.1.11.7
TC Rep_1151_c_79 Rep_1151_c_79_42 35887 36957 + 3.A.1.11.7
pfam Rep_1151_c_79 Rep_1151_c_79_43 37216 37701 + LOR
pfam Rep_1151_c_79 Rep_1151_c_79_44 37722 40340 + tRNA-synt_2c | DHHA1 | tRNA_SAD
CAZyme Rep_1151_c_79 Rep_1151_c_79_45 40428 41876 - GH13_5
Gene ID: Rep_1151_c_79_39
Type: TC
Location: 33176 - 34333 (+)
Gene ID: Rep_1151_c_79_40
Type: TC
Location: 34314 - 35120 (+)
Gene ID: Rep_1151_c_79_41
Type: TC
Location: 35117 - 35890 (+)
Gene ID: Rep_1151_c_79_42
Type: TC
Location: 35887 - 36957 (+)
Gene ID: Rep_1151_c_79_43
Type: pfam
Location: 37216 - 37701 (+)
Gene ID: Rep_1151_c_79_44
Type: pfam
Location: 37722 - 40340 (+)
Gene ID: Rep_1151_c_79_45
Type: CAZyme
Location: 40428 - 41876 (-)

Taxonomic Lineage

Domain
Bacteria
→
Phylum
Bacillota
→
Class
Bacilli
→
Order
Lactobacillales
→
Family
Streptococcaceae
→
Genus
Streptococcus
→

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

Loading chart...

Differentially Abundant Genes

Gene ID Condition Pair log2FC FDR P-value
Rep_1151_c_79_39 vegan > omnivore 1.28461 0.04105
Rep_1151_c_79_40 vegan > omnivore 2.95343 0.04105

🧭 Explore Read Mapping of CGC

← Back to Cluster List