Cluster: Rep_1151_CGC11
🧬 Cluster Details
- Gene Count: 8
- CAZyme Count: 2
- Substrate:
- Genome ID: Rep_1151
- Continent: NA
- Source Study: Leviatan et al., 2022 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | Rep_1151_c_64 | Rep_1151_c_64_16 | 11090 | 12031 | + | 2.A.115.1.1 |
| TF | Rep_1151_c_64 | Rep_1151_c_64_17 | 12065 | 13051 | - | LacI |
| NULL(UNKNOWN) | Rep_1151_c_64 | Rep_1151_c_64_18 | 13061 | 13867 | - |
NULL(UNKNOWN)
[View Structural Homologs] |
| TC | Rep_1151_c_64 | Rep_1151_c_64_19 | 14041 | 14883 | - | 3.A.1.1.26 |
| TC | Rep_1151_c_64 | Rep_1151_c_64_20 | 14885 | 16177 | - | 3.A.1.1.26 |
| TC | Rep_1151_c_64 | Rep_1151_c_64_21 | 16302 | 17570 | - | 3.A.1.1.26 |
| CAZyme | Rep_1151_c_64 | Rep_1151_c_64_22 | 18046 | 19563 | + | GH77 |
| CAZyme | Rep_1151_c_64 | Rep_1151_c_64_23 | 19588 | 21819 | + | GT35 |
Gene ID: Rep_1151_c_64_16
Type: TC
Location: 11090 - 12031 (+)
Type: TC
Location: 11090 - 12031 (+)
Gene ID: Rep_1151_c_64_17
Type: TF
Location: 12065 - 13051 (-)
Type: TF
Location: 12065 - 13051 (-)
Gene ID: Rep_1151_c_64_18
Type:
Location: 13061 - 13867 (-)
Type:
Location: 13061 - 13867 (-)
Gene ID: Rep_1151_c_64_19
Type: TC
Location: 14041 - 14883 (-)
Type: TC
Location: 14041 - 14883 (-)
Gene ID: Rep_1151_c_64_20
Type: TC
Location: 14885 - 16177 (-)
Type: TC
Location: 14885 - 16177 (-)
Gene ID: Rep_1151_c_64_21
Type: TC
Location: 16302 - 17570 (-)
Type: TC
Location: 16302 - 17570 (-)
Gene ID: Rep_1151_c_64_22
Type: CAZyme
Location: 18046 - 19563 (+)
Type: CAZyme
Location: 18046 - 19563 (+)
Gene ID: Rep_1151_c_64_23
Type: CAZyme
Location: 19588 - 21819 (+)
Type: CAZyme
Location: 19588 - 21819 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota
Class
Bacilli
Order
Lactobacillales
Family
Streptococcaceae
Genus
Streptococcus
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.