Cluster: Rep_1151_CGC10
🧬 Cluster Details
- Gene Count: 14
- CAZyme Count: 2
- Substrate:
- Genome ID: Rep_1151
- Continent: NA
- Source Study: Leviatan et al., 2022 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | Rep_1151_c_41 | Rep_1151_c_41_2 | 633 | 2795 | + | GH36 |
| TC | Rep_1151_c_41 | Rep_1151_c_41_3 | 2808 | 4058 | + | 3.A.1.1.28 |
| TC | Rep_1151_c_41 | Rep_1151_c_41_4 | 4077 | 4949 | + | 3.A.1.1.28 |
| TC | Rep_1151_c_41 | Rep_1151_c_41_5 | 4966 | 5799 | + | 3.A.1.1.28 |
| CAZyme | Rep_1151_c_41 | Rep_1151_c_41_6 | 6006 | 7448 | + | GH13_18 |
| TC | Rep_1151_c_41 | Rep_1151_c_41_7 | 7503 | 8774 | + | 9.B.67.1.2 |
| TF | Rep_1151_c_41 | Rep_1151_c_41_8 | 8918 | 9361 | + | MarR |
| pfam | Rep_1151_c_41 | Rep_1151_c_41_9 | 9365 | 10129 | + | SnoaL | SnoaL_2 | SnoaL_2 |
| TC | Rep_1151_c_41 | Rep_1151_c_41_10 | 10144 | 10872 | + | 3.A.1.12.8 |
| TC | Rep_1151_c_41 | Rep_1151_c_41_11 | 10865 | 12385 | + | 3.A.1.12.8 |
| NULL(UNKNOWN) | Rep_1151_c_41 | Rep_1151_c_41_12 | 12724 | 13326 | + |
NULL(UNKNOWN)
[View Structural Homologs] |
| pfam | Rep_1151_c_41 | Rep_1151_c_41_13 | 13323 | 14117 | + | CbiQ |
| TC | Rep_1151_c_41 | Rep_1151_c_41_14 | 14093 | 14929 | + | 3.A.1.26.5 |
| TC | Rep_1151_c_41 | Rep_1151_c_41_15 | 14916 | 15716 | + | 3.A.1.23.2 |
Gene ID: Rep_1151_c_41_2
Type: CAZyme
Location: 633 - 2795 (+)
Type: CAZyme
Location: 633 - 2795 (+)
Gene ID: Rep_1151_c_41_3
Type: TC
Location: 2808 - 4058 (+)
Type: TC
Location: 2808 - 4058 (+)
Gene ID: Rep_1151_c_41_4
Type: TC
Location: 4077 - 4949 (+)
Type: TC
Location: 4077 - 4949 (+)
Gene ID: Rep_1151_c_41_5
Type: TC
Location: 4966 - 5799 (+)
Type: TC
Location: 4966 - 5799 (+)
Gene ID: Rep_1151_c_41_6
Type: CAZyme
Location: 6006 - 7448 (+)
Type: CAZyme
Location: 6006 - 7448 (+)
Gene ID: Rep_1151_c_41_7
Type: TC
Location: 7503 - 8774 (+)
Type: TC
Location: 7503 - 8774 (+)
Gene ID: Rep_1151_c_41_8
Type: TF
Location: 8918 - 9361 (+)
Type: TF
Location: 8918 - 9361 (+)
Gene ID: Rep_1151_c_41_9
Type: pfam
Location: 9365 - 10129 (+)
Type: pfam
Location: 9365 - 10129 (+)
Gene ID: Rep_1151_c_41_10
Type: TC
Location: 10144 - 10872 (+)
Type: TC
Location: 10144 - 10872 (+)
Gene ID: Rep_1151_c_41_11
Type: TC
Location: 10865 - 12385 (+)
Type: TC
Location: 10865 - 12385 (+)
Gene ID: Rep_1151_c_41_12
Type:
Location: 12724 - 13326 (+)
Type:
Location: 12724 - 13326 (+)
Gene ID: Rep_1151_c_41_13
Type: pfam
Location: 13323 - 14117 (+)
Type: pfam
Location: 13323 - 14117 (+)
Gene ID: Rep_1151_c_41_14
Type: TC
Location: 14093 - 14929 (+)
Type: TC
Location: 14093 - 14929 (+)
Gene ID: Rep_1151_c_41_15
Type: TC
Location: 14916 - 15716 (+)
Type: TC
Location: 14916 - 15716 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota
Class
Bacilli
Order
Lactobacillales
Family
Streptococcaceae
Genus
Streptococcus
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.