dbCAN Logo

Cluster: Rep_1147_CGC7

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
CAZyme Rep_1147_c_134 Rep_1147_c_134_5 4268 5092 + CE1
peptidase Rep_1147_c_134 Rep_1147_c_134_6 5113 5853 + S09.UPW
pfam Rep_1147_c_134 Rep_1147_c_134_7 5866 7032 + CPSase_L_D2 | ATP-grasp_4
TC Rep_1147_c_134 Rep_1147_c_134_8 7215 8084 + 1.A.8.2.2
pfam Rep_1147_c_134 Rep_1147_c_134_9 8196 8921 + CppA_N | CppA_C
peptidase Rep_1147_c_134 Rep_1147_c_134_10 8918 9853 + S12.950
TC Rep_1147_c_134 Rep_1147_c_134_11 9862 10767 + 2.A.7.3.31
TC Rep_1147_c_134 Rep_1147_c_134_12 10811 12094 - 2.A.40.1.4
Gene ID: Rep_1147_c_134_5
Type: CAZyme
Location: 4268 - 5092 (+)
Gene ID: Rep_1147_c_134_6
Type: peptidase
Location: 5113 - 5853 (+)
Gene ID: Rep_1147_c_134_7
Type: pfam
Location: 5866 - 7032 (+)
Gene ID: Rep_1147_c_134_8
Type: TC
Location: 7215 - 8084 (+)
Gene ID: Rep_1147_c_134_9
Type: pfam
Location: 8196 - 8921 (+)
Gene ID: Rep_1147_c_134_10
Type: peptidase
Location: 8918 - 9853 (+)
Gene ID: Rep_1147_c_134_11
Type: TC
Location: 9862 - 10767 (+)
Gene ID: Rep_1147_c_134_12
Type: TC
Location: 10811 - 12094 (-)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

Loading chart...

Differentially Abundant Genes

Gene ID Condition Pair log2FC FDR P-value
Rep_1147_c_134_7 vegan > omnivore 1.55286 0.02646

🧭 Explore Read Mapping of CGC

← Back to Cluster List