dbCAN Logo

Cluster: Rep_1147_CGC13

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
CAZyme Rep_1147_c_171 Rep_1147_c_171_11 7886 8806 - GH20
pfam Rep_1147_c_171 Rep_1147_c_171_12 8863 9285 - YSIRK_signal
TF Rep_1147_c_171 Rep_1147_c_171_13 9579 10295 - GntR
CAZyme Rep_1147_c_171 Rep_1147_c_171_14 10625 12412 + GH35
TC Rep_1147_c_171 Rep_1147_c_171_15 12409 12885 + 4.A.6.1.18
TC Rep_1147_c_171 Rep_1147_c_171_16 12912 13817 + 4.A.6.1.18
TC Rep_1147_c_171 Rep_1147_c_171_17 13804 14619 + 4.A.6.1.18
TC Rep_1147_c_171 Rep_1147_c_171_18 14626 15030 + 4.A.6.1.18
Gene ID: Rep_1147_c_171_11
Type: CAZyme
Location: 7886 - 8806 (-)
Gene ID: Rep_1147_c_171_12
Type: pfam
Location: 8863 - 9285 (-)
Gene ID: Rep_1147_c_171_13
Type: TF
Location: 9579 - 10295 (-)
Gene ID: Rep_1147_c_171_14
Type: CAZyme
Location: 10625 - 12412 (+)
Gene ID: Rep_1147_c_171_15
Type: TC
Location: 12409 - 12885 (+)
Gene ID: Rep_1147_c_171_16
Type: TC
Location: 12912 - 13817 (+)
Gene ID: Rep_1147_c_171_17
Type: TC
Location: 13804 - 14619 (+)
Gene ID: Rep_1147_c_171_18
Type: TC
Location: 14626 - 15030 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

Loading chart...

No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

← Back to Cluster List