Cluster: Rep_1142_CGC6
🧬 Cluster Details
- Gene Count: 3
- CAZyme Count: 1
- Substrate:
- Genome ID: Rep_1142
- Continent: NA
- Source Study: Leviatan et al., 2022 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | Rep_1142_c_1 | Rep_1142_c_1_120 | 126175 | 127614 | + | GH1 |
| pfam | Rep_1142_c_1 | Rep_1142_c_1_121 | 127735 | 128679 | + | PMI_typeI_cat | MPI_cupin_dom |
| TC | Rep_1142_c_1 | Rep_1142_c_1_122 | 128720 | 130060 | - | 2.A.22.5.3 |
Gene ID: Rep_1142_c_1_120
Type: CAZyme
Location: 126175 - 127614 (+)
Type: CAZyme
Location: 126175 - 127614 (+)
Gene ID: Rep_1142_c_1_121
Type: pfam
Location: 127735 - 128679 (+)
Type: pfam
Location: 127735 - 128679 (+)
Gene ID: Rep_1142_c_1_122
Type: TC
Location: 128720 - 130060 (-)
Type: TC
Location: 128720 - 130060 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota
Class
Bacilli
Order
Lactobacillales
Family
Streptococcaceae
Genus
Streptococcus
Species
Streptococcus mitis_CB
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.