Cluster: Rep_1142_CGC5
🧬 Cluster Details
- Gene Count: 3
- CAZyme Count: 1
- Substrate:
- Genome ID: Rep_1142
- Continent: NA
- Source Study: Leviatan et al., 2022 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | Rep_1142_c_1 | Rep_1142_c_1_82 | 91784 | 92425 | + | 3.A.1.134.10 |
| pfam | Rep_1142_c_1 | Rep_1142_c_1_83 | 92635 | 93987 | + | Mur_ligase_C | Mur_ligase_M | MurD-like_N |
| CAZyme | Rep_1142_c_1 | Rep_1142_c_1_84 | 93989 | 95047 | + | GT28 |
Gene ID: Rep_1142_c_1_82
Type: TC
Location: 91784 - 92425 (+)
Type: TC
Location: 91784 - 92425 (+)
Gene ID: Rep_1142_c_1_83
Type: pfam
Location: 92635 - 93987 (+)
Type: pfam
Location: 92635 - 93987 (+)
Gene ID: Rep_1142_c_1_84
Type: CAZyme
Location: 93989 - 95047 (+)
Type: CAZyme
Location: 93989 - 95047 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota
Class
Bacilli
Order
Lactobacillales
Family
Streptococcaceae
Genus
Streptococcus
Species
Streptococcus mitis_CB
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.