Cluster: Rep_1142_CGC4
🧬 Cluster Details
- Gene Count: 5
- CAZyme Count: 1
- Substrate:
- Genome ID: Rep_1142
- Continent: NA
- Source Study: Leviatan et al., 2022 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | Rep_1142_c_0 | Rep_1142_c_0_99 | 111506 | 111910 | - | 4.A.6.1.18 |
| TC | Rep_1142_c_0 | Rep_1142_c_0_100 | 111914 | 112735 | - | 4.A.6.1.18 |
| TC | Rep_1142_c_0 | Rep_1142_c_0_101 | 112722 | 113627 | - | 4.A.6.1.18 |
| TC | Rep_1142_c_0 | Rep_1142_c_0_102 | 113654 | 114130 | - | 4.A.6.1.18 |
| CAZyme | Rep_1142_c_0 | Rep_1142_c_0_103 | 114127 | 115914 | - | GH35 |
Gene ID: Rep_1142_c_0_99
Type: TC
Location: 111506 - 111910 (-)
Type: TC
Location: 111506 - 111910 (-)
Gene ID: Rep_1142_c_0_100
Type: TC
Location: 111914 - 112735 (-)
Type: TC
Location: 111914 - 112735 (-)
Gene ID: Rep_1142_c_0_101
Type: TC
Location: 112722 - 113627 (-)
Type: TC
Location: 112722 - 113627 (-)
Gene ID: Rep_1142_c_0_102
Type: TC
Location: 113654 - 114130 (-)
Type: TC
Location: 113654 - 114130 (-)
Gene ID: Rep_1142_c_0_103
Type: CAZyme
Location: 114127 - 115914 (-)
Type: CAZyme
Location: 114127 - 115914 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota
Class
Bacilli
Order
Lactobacillales
Family
Streptococcaceae
Genus
Streptococcus
Species
Streptococcus mitis_CB
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.