Cluster: Rep_1142_CGC3
🧬 Cluster Details
- Gene Count: 7
- CAZyme Count: 1
- Substrate:
- Genome ID: Rep_1142
- CGC Family ID: CGCFAM_00616
- Continent: NA
- Source Study: Leviatan et al., 2022 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | Rep_1142_c_0 | Rep_1142_c_0_77 | 87108 | 88124 | - | GT2 |
| TC | Rep_1142_c_0 | Rep_1142_c_0_78 | 88280 | 88945 | - | 2.A.38.4.6 |
| TC | Rep_1142_c_0 | Rep_1142_c_0_79 | 88959 | 90338 | - | 2.A.38.4.1 |
| pfam | Rep_1142_c_0 | Rep_1142_c_0_80 | 90372 | 91136 | - | PNP_UDP_1 |
| STP | Rep_1142_c_0 | Rep_1142_c_0_81 | 91409 | 92032 | - | TetR_N |
| TC | Rep_1142_c_0 | Rep_1142_c_0_82 | 92072 | 93154 | - | 3.A.1.105.6 |
| TC | Rep_1142_c_0 | Rep_1142_c_0_83 | 93156 | 93872 | - | 3.A.1.105.6 |
Gene ID: Rep_1142_c_0_77
Type: CAZyme
Location: 87108 - 88124 (-)
Type: CAZyme
Location: 87108 - 88124 (-)
Gene ID: Rep_1142_c_0_78
Type: TC
Location: 88280 - 88945 (-)
Type: TC
Location: 88280 - 88945 (-)
Gene ID: Rep_1142_c_0_79
Type: TC
Location: 88959 - 90338 (-)
Type: TC
Location: 88959 - 90338 (-)
Gene ID: Rep_1142_c_0_80
Type: pfam
Location: 90372 - 91136 (-)
Type: pfam
Location: 90372 - 91136 (-)
Gene ID: Rep_1142_c_0_81
Type: STP
Location: 91409 - 92032 (-)
Type: STP
Location: 91409 - 92032 (-)
Gene ID: Rep_1142_c_0_82
Type: TC
Location: 92072 - 93154 (-)
Type: TC
Location: 92072 - 93154 (-)
Gene ID: Rep_1142_c_0_83
Type: TC
Location: 93156 - 93872 (-)
Type: TC
Location: 93156 - 93872 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota
Class
Bacilli
Order
Lactobacillales
Family
Streptococcaceae
Genus
Streptococcus
Species
Streptococcus mitis_CB
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.