Cluster: Rep_1142_CGC19
🧬 Cluster Details
- Gene Count: 6
- CAZyme Count: 1
- Substrate:
- Genome ID: Rep_1142
- Continent: NA
- Source Study: Leviatan et al., 2022 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | Rep_1142_c_13 | Rep_1142_c_13_12 | 12795 | 13946 | + | CE9 |
| pfam | Rep_1142_c_13 | Rep_1142_c_13_13 | 14109 | 15167 | + | ADH_zinc_N | ADH_N |
| pfam | Rep_1142_c_13 | Rep_1142_c_13_14 | 15318 | 15683 | + | DUF1033 |
| TC | Rep_1142_c_13 | Rep_1142_c_13_15 | 15760 | 16701 | + | 3.A.14.1.2 |
| TC | Rep_1142_c_13 | Rep_1142_c_13_16 | 16793 | 17665 | + | 3.A.14.1.1 |
| TC | Rep_1142_c_13 | Rep_1142_c_13_17 | 17667 | 17990 | + | 3.A.14.1.2 |
Gene ID: Rep_1142_c_13_12
Type: CAZyme
Location: 12795 - 13946 (+)
Type: CAZyme
Location: 12795 - 13946 (+)
Gene ID: Rep_1142_c_13_13
Type: pfam
Location: 14109 - 15167 (+)
Type: pfam
Location: 14109 - 15167 (+)
Gene ID: Rep_1142_c_13_14
Type: pfam
Location: 15318 - 15683 (+)
Type: pfam
Location: 15318 - 15683 (+)
Gene ID: Rep_1142_c_13_15
Type: TC
Location: 15760 - 16701 (+)
Type: TC
Location: 15760 - 16701 (+)
Gene ID: Rep_1142_c_13_16
Type: TC
Location: 16793 - 17665 (+)
Type: TC
Location: 16793 - 17665 (+)
Gene ID: Rep_1142_c_13_17
Type: TC
Location: 17667 - 17990 (+)
Type: TC
Location: 17667 - 17990 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota
Class
Bacilli
Order
Lactobacillales
Family
Streptococcaceae
Genus
Streptococcus
Species
Streptococcus mitis_CB
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.