Cluster: Rep_1142_CGC18
🧬 Cluster Details
- Gene Count: 3
- CAZyme Count: 1
- Substrate:
- Genome ID: Rep_1142
- Continent: NA
- Source Study: Leviatan et al., 2022 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | Rep_1142_c_13 | Rep_1142_c_13_3 | 3555 | 4835 | + | 2.A.66.1.34 |
| pfam | Rep_1142_c_13 | Rep_1142_c_13_4 | 4839 | 5465 | + | Hydrolase | HAD | Hydrolase_like | HAD_2 |
| CAZyme | Rep_1142_c_13 | Rep_1142_c_13_5 | 5625 | 6830 | + | CBM50 |
Gene ID: Rep_1142_c_13_3
Type: TC
Location: 3555 - 4835 (+)
Type: TC
Location: 3555 - 4835 (+)
Gene ID: Rep_1142_c_13_4
Type: pfam
Location: 4839 - 5465 (+)
Type: pfam
Location: 4839 - 5465 (+)
Gene ID: Rep_1142_c_13_5
Type: CAZyme
Location: 5625 - 6830 (+)
Type: CAZyme
Location: 5625 - 6830 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota
Class
Bacilli
Order
Lactobacillales
Family
Streptococcaceae
Genus
Streptococcus
Species
Streptococcus mitis_CB
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.