Cluster: Rep_1142_CGC17
🧬 Cluster Details
- Gene Count: 5
- CAZyme Count: 2
- Substrate:
- Genome ID: Rep_1142
- Continent: NA
- Source Study: Leviatan et al., 2022 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | Rep_1142_c_12 | Rep_1142_c_12_206 | 226501 | 227208 | - | GH13_18 |
| TC | Rep_1142_c_12 | Rep_1142_c_12_207 | 227192 | 227512 | - | 4.A.3.2.3 |
| TC | Rep_1142_c_12 | Rep_1142_c_12_208 | 227526 | 228839 | - | 4.A.3.2.8 |
| TC | Rep_1142_c_12 | Rep_1142_c_12_209 | 228850 | 229152 | - | 4.A.3.2.3 |
| CAZyme | Rep_1142_c_12 | Rep_1142_c_12_210 | 229165 | 230595 | - | GH1 |
Gene ID: Rep_1142_c_12_206
Type: CAZyme
Location: 226501 - 227208 (-)
Type: CAZyme
Location: 226501 - 227208 (-)
Gene ID: Rep_1142_c_12_207
Type: TC
Location: 227192 - 227512 (-)
Type: TC
Location: 227192 - 227512 (-)
Gene ID: Rep_1142_c_12_208
Type: TC
Location: 227526 - 228839 (-)
Type: TC
Location: 227526 - 228839 (-)
Gene ID: Rep_1142_c_12_209
Type: TC
Location: 228850 - 229152 (-)
Type: TC
Location: 228850 - 229152 (-)
Gene ID: Rep_1142_c_12_210
Type: CAZyme
Location: 229165 - 230595 (-)
Type: CAZyme
Location: 229165 - 230595 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota
Class
Bacilli
Order
Lactobacillales
Family
Streptococcaceae
Genus
Streptococcus
Species
Streptococcus mitis_CB
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.