Cluster: Rep_1142_CGC14
🧬 Cluster Details
- Gene Count: 4
- CAZyme Count: 1
- Substrate:
- Genome ID: Rep_1142
- Continent: NA
- Source Study: Leviatan et al., 2022 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | Rep_1142_c_12 | Rep_1142_c_12_31 | 31973 | 33082 | + | 2.A.86.1.8 |
| pfam | Rep_1142_c_12 | Rep_1142_c_12_32 | 33289 | 34485 | + | GTP_EFTU | GTP_EFTU_D3 | GTP_EFTU_D2 |
| TC | Rep_1142_c_12 | Rep_1142_c_12_33 | 34744 | 35826 | - | 1.I.1.1.3 |
| CAZyme | Rep_1142_c_12 | Rep_1142_c_12_34 | 35816 | 36799 | - | GH109 |
Gene ID: Rep_1142_c_12_31
Type: TC
Location: 31973 - 33082 (+)
Type: TC
Location: 31973 - 33082 (+)
Gene ID: Rep_1142_c_12_32
Type: pfam
Location: 33289 - 34485 (+)
Type: pfam
Location: 33289 - 34485 (+)
Gene ID: Rep_1142_c_12_33
Type: TC
Location: 34744 - 35826 (-)
Type: TC
Location: 34744 - 35826 (-)
Gene ID: Rep_1142_c_12_34
Type: CAZyme
Location: 35816 - 36799 (-)
Type: CAZyme
Location: 35816 - 36799 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota
Class
Bacilli
Order
Lactobacillales
Family
Streptococcaceae
Genus
Streptococcus
Species
Streptococcus mitis_CB
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.