Cluster: Rep_1142_CGC11
🧬 Cluster Details
- Gene Count: 6
- CAZyme Count: 1
- Substrate:
- Genome ID: Rep_1142
- Continent: NA
- Source Study: Leviatan et al., 2022 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | Rep_1142_c_6 | Rep_1142_c_6_5 | 5359 | 6276 | + | 3.A.1.1.10 |
| TC | Rep_1142_c_6 | Rep_1142_c_6_6 | 6294 | 7190 | + | 3.A.1.1.10 |
| STP | Rep_1142_c_6 | Rep_1142_c_6_7 | 7200 | 8765 | + | SBP_bac_1 |
| pfam | Rep_1142_c_6 | Rep_1142_c_6_8 | 8970 | 9614 | + | DUF624 |
| CAZyme | Rep_1142_c_6 | Rep_1142_c_6_9 | 9611 | 11824 | + | GH31_15 |
| TC | Rep_1142_c_6 | Rep_1142_c_6_10 | 12042 | 12497 | + | 2.A.17.1.6 |
Gene ID: Rep_1142_c_6_5
Type: TC
Location: 5359 - 6276 (+)
Type: TC
Location: 5359 - 6276 (+)
Gene ID: Rep_1142_c_6_6
Type: TC
Location: 6294 - 7190 (+)
Type: TC
Location: 6294 - 7190 (+)
Gene ID: Rep_1142_c_6_7
Type: STP
Location: 7200 - 8765 (+)
Type: STP
Location: 7200 - 8765 (+)
Gene ID: Rep_1142_c_6_8
Type: pfam
Location: 8970 - 9614 (+)
Type: pfam
Location: 8970 - 9614 (+)
Gene ID: Rep_1142_c_6_9
Type: CAZyme
Location: 9611 - 11824 (+)
Type: CAZyme
Location: 9611 - 11824 (+)
Gene ID: Rep_1142_c_6_10
Type: TC
Location: 12042 - 12497 (+)
Type: TC
Location: 12042 - 12497 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota
Class
Bacilli
Order
Lactobacillales
Family
Streptococcaceae
Genus
Streptococcus
Species
Streptococcus mitis_CB
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.