Cluster: Rep_1142_CGC1
🧬 Cluster Details
- Gene Count: 4
- CAZyme Count: 1
- Substrate:
- Genome ID: Rep_1142
- Continent: NA
- Source Study: Leviatan et al., 2022 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | Rep_1142_c_0 | Rep_1142_c_0_17 | 19303 | 20277 | - | 2.A.7.3.12 |
| CAZyme | Rep_1142_c_0 | Rep_1142_c_0_18 | 20297 | 22780 | - | GT51 |
| pfam | Rep_1142_c_0 | Rep_1142_c_0_19 | 22921 | 24177 | + | tRNA-synt_1b | S4 | SYY_C-terminal |
| TC | Rep_1142_c_0 | Rep_1142_c_0_20 | 24254 | 26314 | - | 3.A.3.32.6 |
Gene ID: Rep_1142_c_0_17
Type: TC
Location: 19303 - 20277 (-)
Type: TC
Location: 19303 - 20277 (-)
Gene ID: Rep_1142_c_0_18
Type: CAZyme
Location: 20297 - 22780 (-)
Type: CAZyme
Location: 20297 - 22780 (-)
Gene ID: Rep_1142_c_0_19
Type: pfam
Location: 22921 - 24177 (+)
Type: pfam
Location: 22921 - 24177 (+)
Gene ID: Rep_1142_c_0_20
Type: TC
Location: 24254 - 26314 (-)
Type: TC
Location: 24254 - 26314 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota
Class
Bacilli
Order
Lactobacillales
Family
Streptococcaceae
Genus
Streptococcus
Species
Streptococcus mitis_CB
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.