Cluster: Rep_112_CGC3
🧬 Cluster Details
- Gene Count: 4
- CAZyme Count: 1
- Substrate:
- Genome ID: Rep_112
- Continent: NA
- Source Study: Leviatan et al., 2022 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | Rep_112_c_23 | Rep_112_c_23_1 | 149 | 3118 | - | CBM32 |
| NULL(UNKNOWN) | Rep_112_c_23 | Rep_112_c_23_2 | 3239 | 4222 | - |
NULL(UNKNOWN)
[View Structural Homologs] |
| pfam | Rep_112_c_23 | Rep_112_c_23_3 | 4249 | 6177 | - | SusD_RagB | SusD-like_3 |
| TC | Rep_112_c_23 | Rep_112_c_23_4 | 6201 | 9329 | - | 1.B.14.6.1 |
Gene ID: Rep_112_c_23_1
Type: CAZyme
Location: 149 - 3118 (-)
Type: CAZyme
Location: 149 - 3118 (-)
Gene ID: Rep_112_c_23_2
Type:
Location: 3239 - 4222 (-)
Type:
Location: 3239 - 4222 (-)
Gene ID: Rep_112_c_23_3
Type: pfam
Location: 4249 - 6177 (-)
Type: pfam
Location: 4249 - 6177 (-)
Gene ID: Rep_112_c_23_4
Type: TC
Location: 6201 - 9329 (-)
Type: TC
Location: 6201 - 9329 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Porphyromonadaceae
Genus
Porphyromonas_A
Species
Porphyromonas_A sp001808555
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.