Cluster: Rep_112_CGC2
🧬 Cluster Details
- Gene Count: 5
- CAZyme Count: 1
- Substrate:
- Genome ID: Rep_112
- Continent: NA
- Source Study: Leviatan et al., 2022 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | Rep_112_c_9 | Rep_112_c_9_2 | 1462 | 2877 | - | GH18 |
| pfam | Rep_112_c_9 | Rep_112_c_9_3 | 2903 | 4120 | - | BT_3987-like_N | Laminin_G_3 |
| NULL(UNKNOWN) | Rep_112_c_9 | Rep_112_c_9_4 | 4131 | 5186 | - |
NULL(UNKNOWN)
[View Structural Homologs] |
| TC | Rep_112_c_9 | Rep_112_c_9_5 | 5212 | 6774 | - | 8.A.46.2.1 |
| TC | Rep_112_c_9 | Rep_112_c_9_6 | 6794 | 9724 | - | 1.B.14.6.13 |
Gene ID: Rep_112_c_9_2
Type: CAZyme
Location: 1462 - 2877 (-)
Type: CAZyme
Location: 1462 - 2877 (-)
Gene ID: Rep_112_c_9_3
Type: pfam
Location: 2903 - 4120 (-)
Type: pfam
Location: 2903 - 4120 (-)
Gene ID: Rep_112_c_9_4
Type:
Location: 4131 - 5186 (-)
Type:
Location: 4131 - 5186 (-)
Gene ID: Rep_112_c_9_5
Type: TC
Location: 5212 - 6774 (-)
Type: TC
Location: 5212 - 6774 (-)
Gene ID: Rep_112_c_9_6
Type: TC
Location: 6794 - 9724 (-)
Type: TC
Location: 6794 - 9724 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Porphyromonadaceae
Genus
Porphyromonas_A
Species
Porphyromonas_A sp001808555
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.