Cluster: Rep_112_CGC14
🧬 Cluster Details
- Gene Count: 3
- CAZyme Count: 1
- Substrate:
- Genome ID: Rep_112
- Continent: NA
- Source Study: Leviatan et al., 2022 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | Rep_112_c_115 | Rep_112_c_115_5 | 3989 | 6364 | + | GH95 |
| pfam | Rep_112_c_115 | Rep_112_c_115_6 | 6476 | 7396 | + | DHDPS |
| TC | Rep_112_c_115 | Rep_112_c_115_7 | 7475 | 8695 | + | 2.A.1.10.2 |
Gene ID: Rep_112_c_115_5
Type: CAZyme
Location: 3989 - 6364 (+)
Type: CAZyme
Location: 3989 - 6364 (+)
Gene ID: Rep_112_c_115_6
Type: pfam
Location: 6476 - 7396 (+)
Type: pfam
Location: 6476 - 7396 (+)
Gene ID: Rep_112_c_115_7
Type: TC
Location: 7475 - 8695 (+)
Type: TC
Location: 7475 - 8695 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Porphyromonadaceae
Genus
Porphyromonas_A
Species
Porphyromonas_A sp001808555
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.