Cluster: Rep_112_CGC13
🧬 Cluster Details
- Gene Count: 3
- CAZyme Count: 1
- Substrate:
- Genome ID: Rep_112
- Continent: NA
- Source Study: Leviatan et al., 2022 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | Rep_112_c_102 | Rep_112_c_102_6 | 6493 | 9624 | - | 1.B.14.6.1 |
| CAZyme | Rep_112_c_102 | Rep_112_c_102_7 | 9695 | 11980 | - | GH20 |
| TC | Rep_112_c_102 | Rep_112_c_102_8 | 11994 | 13415 | - | 2.A.1.1.55 |
Gene ID: Rep_112_c_102_6
Type: TC
Location: 6493 - 9624 (-)
Type: TC
Location: 6493 - 9624 (-)
Gene ID: Rep_112_c_102_7
Type: CAZyme
Location: 9695 - 11980 (-)
Type: CAZyme
Location: 9695 - 11980 (-)
Gene ID: Rep_112_c_102_8
Type: TC
Location: 11994 - 13415 (-)
Type: TC
Location: 11994 - 13415 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Porphyromonadaceae
Genus
Porphyromonas_A
Species
Porphyromonas_A sp001808555
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.