dbCAN Logo

Cluster: Rep_1125_CGC9

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
CAZyme Rep_1125_c_4 Rep_1125_c_4_38 43229 44839 - GH13_31
CAZyme Rep_1125_c_4 Rep_1125_c_4_39 44984 46426 - GH13_18
TC Rep_1125_c_4 Rep_1125_c_4_40 46489 47322 - 3.A.1.1.28
TC Rep_1125_c_4 Rep_1125_c_4_41 47332 48198 - 3.A.1.1.28
TC Rep_1125_c_4 Rep_1125_c_4_42 48211 49482 - 3.A.1.1.28
CAZyme Rep_1125_c_4 Rep_1125_c_4_43 49494 51656 - GH36
TF Rep_1125_c_4 Rep_1125_c_4_44 51767 52597 + HTH_AraC | HTH_AraC
TC Rep_1125_c_4 Rep_1125_c_4_45 52896 54029 - 3.A.1.1.28
Gene ID: Rep_1125_c_4_38
Type: CAZyme
Location: 43229 - 44839 (-)
Gene ID: Rep_1125_c_4_39
Type: CAZyme
Location: 44984 - 46426 (-)
Gene ID: Rep_1125_c_4_40
Type: TC
Location: 46489 - 47322 (-)
Gene ID: Rep_1125_c_4_41
Type: TC
Location: 47332 - 48198 (-)
Gene ID: Rep_1125_c_4_42
Type: TC
Location: 48211 - 49482 (-)
Gene ID: Rep_1125_c_4_43
Type: CAZyme
Location: 49494 - 51656 (-)
Gene ID: Rep_1125_c_4_44
Type: TF
Location: 51767 - 52597 (+)
Gene ID: Rep_1125_c_4_45
Type: TC
Location: 52896 - 54029 (-)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

Loading chart...

No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

← Back to Cluster List