Cluster: Rep_1125_CGC1
🧬 Cluster Details
- Gene Count: 4
- CAZyme Count: 1
- Substrate:
- Genome ID: Rep_1125
- Continent: NA
- Source Study: Leviatan et al., 2022 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | Rep_1125_c_0 | Rep_1125_c_0_27 | 21305 | 22744 | - | GH32 |
| TC | Rep_1125_c_0 | Rep_1125_c_0_28 | 22945 | 24852 | + | 4.A.1.2.12 |
| pfam | Rep_1125_c_0 | Rep_1125_c_0_29 | 25007 | 25888 | + | ROK |
| TC | Rep_1125_c_0 | Rep_1125_c_0_30 | 26186 | 28708 | + | 3.A.5.1.1 |
Gene ID: Rep_1125_c_0_27
Type: CAZyme
Location: 21305 - 22744 (-)
Type: CAZyme
Location: 21305 - 22744 (-)
Gene ID: Rep_1125_c_0_28
Type: TC
Location: 22945 - 24852 (+)
Type: TC
Location: 22945 - 24852 (+)
Gene ID: Rep_1125_c_0_29
Type: pfam
Location: 25007 - 25888 (+)
Type: pfam
Location: 25007 - 25888 (+)
Gene ID: Rep_1125_c_0_30
Type: TC
Location: 26186 - 28708 (+)
Type: TC
Location: 26186 - 28708 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota
Class
Bacilli
Order
Lactobacillales
Family
Streptococcaceae
Genus
Streptococcus
Species
Streptococcus infantarius
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.