Cluster: Rep_1119_CGC8
🧬 Cluster Details
- Gene Count: 13
- CAZyme Count: 6
- Substrate:
- Genome ID: Rep_1119
- CGC Family ID: CGCFAM_00598
- Continent: NA
- Source Study: Leviatan et al., 2022 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | Rep_1119_c_6 | Rep_1119_c_6_149 | 162309 | 163415 | - | GT4 |
| TC | Rep_1119_c_6 | Rep_1119_c_6_150 | 163417 | 164871 | - | 2.A.66.2.16 |
| NULL(UNKNOWN) | Rep_1119_c_6 | Rep_1119_c_6_151 | 164864 | 166105 | - |
NULL(UNKNOWN)
[View Structural Homologs] |
| CAZyme | Rep_1119_c_6 | Rep_1119_c_6_152 | 166102 | 167031 | - | GT2 |
| CAZyme | Rep_1119_c_6 | Rep_1119_c_6_153 | 167048 | 168160 | - | GT4 |
| pfam | Rep_1119_c_6 | Rep_1119_c_6_154 | 168190 | 169179 | - | Stealth_CR2 | Stealth_CR1 |
| CAZyme | Rep_1119_c_6 | Rep_1119_c_6_155 | 169323 | 170297 | - | GT2 |
| pfam | Rep_1119_c_6 | Rep_1119_c_6_156 | 170409 | 170960 | - | DUF1919 |
| CAZyme | Rep_1119_c_6 | Rep_1119_c_6_157 | 171005 | 172150 | - | GT4 |
| CAZyme | Rep_1119_c_6 | Rep_1119_c_6_158 | 172153 | 173325 | - | GT4 |
| TC | Rep_1119_c_6 | Rep_1119_c_6_159 | 173358 | 174725 | - | 9.B.18.1.2 |
| TC | Rep_1119_c_6 | Rep_1119_c_6_160 | 174783 | 175523 | - | 8.A.3.2.3 |
| TC | Rep_1119_c_6 | Rep_1119_c_6_161 | 175533 | 176225 | - | 8.A.3.2.3 |
Gene ID: Rep_1119_c_6_149
Type: CAZyme
Location: 162309 - 163415 (-)
Type: CAZyme
Location: 162309 - 163415 (-)
Gene ID: Rep_1119_c_6_150
Type: TC
Location: 163417 - 164871 (-)
Type: TC
Location: 163417 - 164871 (-)
Gene ID: Rep_1119_c_6_151
Type:
Location: 164864 - 166105 (-)
Type:
Location: 164864 - 166105 (-)
Gene ID: Rep_1119_c_6_152
Type: CAZyme
Location: 166102 - 167031 (-)
Type: CAZyme
Location: 166102 - 167031 (-)
Gene ID: Rep_1119_c_6_153
Type: CAZyme
Location: 167048 - 168160 (-)
Type: CAZyme
Location: 167048 - 168160 (-)
Gene ID: Rep_1119_c_6_154
Type: pfam
Location: 168190 - 169179 (-)
Type: pfam
Location: 168190 - 169179 (-)
Gene ID: Rep_1119_c_6_155
Type: CAZyme
Location: 169323 - 170297 (-)
Type: CAZyme
Location: 169323 - 170297 (-)
Gene ID: Rep_1119_c_6_156
Type: pfam
Location: 170409 - 170960 (-)
Type: pfam
Location: 170409 - 170960 (-)
Gene ID: Rep_1119_c_6_157
Type: CAZyme
Location: 171005 - 172150 (-)
Type: CAZyme
Location: 171005 - 172150 (-)
Gene ID: Rep_1119_c_6_158
Type: CAZyme
Location: 172153 - 173325 (-)
Type: CAZyme
Location: 172153 - 173325 (-)
Gene ID: Rep_1119_c_6_159
Type: TC
Location: 173358 - 174725 (-)
Type: TC
Location: 173358 - 174725 (-)
Gene ID: Rep_1119_c_6_160
Type: TC
Location: 174783 - 175523 (-)
Type: TC
Location: 174783 - 175523 (-)
Gene ID: Rep_1119_c_6_161
Type: TC
Location: 175533 - 176225 (-)
Type: TC
Location: 175533 - 176225 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota
Class
Bacilli
Order
Lactobacillales
Family
Streptococcaceae
Genus
Streptococcus
Species
Streptococcus sp001556435
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.