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Cluster: Rep_1119_CGC20

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC Rep_1119_c_17 Rep_1119_c_17_89 93309 93992 + 3.A.1.122.7
TC Rep_1119_c_17 Rep_1119_c_17_90 93961 95262 + 3.A.1.122.13
pfam Rep_1119_c_17 Rep_1119_c_17_91 95448 96902 + NAPRTase | NAPRTase_N | NAPRTase_C
pfam Rep_1119_c_17 Rep_1119_c_17_92 96914 97735 + NAD_synthase
TC Rep_1119_c_17 Rep_1119_c_17_93 97751 98194 + 9.B.124.1.4
peptidase Rep_1119_c_17 Rep_1119_c_17_94 98296 99633 + C01.UPB
CAZyme Rep_1119_c_17 Rep_1119_c_17_95 99737 102028 - GT51
Gene ID: Rep_1119_c_17_89
Type: TC
Location: 93309 - 93992 (+)
Gene ID: Rep_1119_c_17_90
Type: TC
Location: 93961 - 95262 (+)
Gene ID: Rep_1119_c_17_91
Type: pfam
Location: 95448 - 96902 (+)
Gene ID: Rep_1119_c_17_92
Type: pfam
Location: 96914 - 97735 (+)
Gene ID: Rep_1119_c_17_93
Type: TC
Location: 97751 - 98194 (+)
Gene ID: Rep_1119_c_17_94
Type: peptidase
Location: 98296 - 99633 (+)
Gene ID: Rep_1119_c_17_95
Type: CAZyme
Location: 99737 - 102028 (-)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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Differentially Abundant Genes

Gene ID Condition Pair log2FC FDR P-value
Rep_1119_c_17_89 vegetarian > omnivore 2.22507 0.01865
Rep_1119_c_17_90 vegan > omnivore 1.36620 0.00937
Rep_1119_c_17_93 vegan > omnivore 1.13527 0.00937

🧭 Explore Read Mapping of CGC

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