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Cluster: Rep_1119_CGC19

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
CAZyme Rep_1119_c_16 Rep_1119_c_16_98 112450 114060 - GH13_31
CAZyme Rep_1119_c_16 Rep_1119_c_16_99 114285 115748 - GH13_18
STP Rep_1119_c_16 Rep_1119_c_16_100 115741 116676 - PfkB
TC Rep_1119_c_16 Rep_1119_c_16_101 116783 117916 - 3.A.1.1.28
TC Rep_1119_c_16 Rep_1119_c_16_102 117998 118831 - 3.A.1.1.28
TC Rep_1119_c_16 Rep_1119_c_16_103 118848 119714 - 3.A.1.1.28
TC Rep_1119_c_16 Rep_1119_c_16_104 119731 120981 - 3.A.1.1.28
CAZyme Rep_1119_c_16 Rep_1119_c_16_105 120997 123162 - GH36
TF Rep_1119_c_16 Rep_1119_c_16_106 123268 124095 + HTH_3 | HTH_AraC
CAZyme Rep_1119_c_16 Rep_1119_c_16_107 124265 125875 - GH13_31
Gene ID: Rep_1119_c_16_98
Type: CAZyme
Location: 112450 - 114060 (-)
Gene ID: Rep_1119_c_16_99
Type: CAZyme
Location: 114285 - 115748 (-)
Gene ID: Rep_1119_c_16_100
Type: STP
Location: 115741 - 116676 (-)
Gene ID: Rep_1119_c_16_101
Type: TC
Location: 116783 - 117916 (-)
Gene ID: Rep_1119_c_16_102
Type: TC
Location: 117998 - 118831 (-)
Gene ID: Rep_1119_c_16_103
Type: TC
Location: 118848 - 119714 (-)
Gene ID: Rep_1119_c_16_104
Type: TC
Location: 119731 - 120981 (-)
Gene ID: Rep_1119_c_16_105
Type: CAZyme
Location: 120997 - 123162 (-)
Gene ID: Rep_1119_c_16_106
Type: TF
Location: 123268 - 124095 (+)
Gene ID: Rep_1119_c_16_107
Type: CAZyme
Location: 124265 - 125875 (-)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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