Cluster: Rep_1119_CGC10
🧬 Cluster Details
- Gene Count: 3
- CAZyme Count: 1
- Substrate:
- Genome ID: Rep_1119
- Continent: NA
- Source Study: Leviatan et al., 2022 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | Rep_1119_c_7 | Rep_1119_c_7_34 | 40933 | 42177 | - | 2.A.120.1.1 |
| CAZyme | Rep_1119_c_7 | Rep_1119_c_7_35 | 42283 | 43431 | - | CE9 |
| TC | Rep_1119_c_7 | Rep_1119_c_7_36 | 43516 | 45147 | - | 2.A.58.2.2 |
Gene ID: Rep_1119_c_7_34
Type: TC
Location: 40933 - 42177 (-)
Type: TC
Location: 40933 - 42177 (-)
Gene ID: Rep_1119_c_7_35
Type: CAZyme
Location: 42283 - 43431 (-)
Type: CAZyme
Location: 42283 - 43431 (-)
Gene ID: Rep_1119_c_7_36
Type: TC
Location: 43516 - 45147 (-)
Type: TC
Location: 43516 - 45147 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota
Class
Bacilli
Order
Lactobacillales
Family
Streptococcaceae
Genus
Streptococcus
Species
Streptococcus sp001556435
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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Differentially Abundant Genes
| Gene ID | Condition Pair | log2FC | FDR P-value |
|---|---|---|---|
| Rep_1119_c_7_36 | vegan > omnivore | 1.29877 | 0.00937 |
| Rep_1119_c_7_36 | vegetarian > omnivore | 2.04931 | 0.00603 |