Cluster: Rep_1117_CGC14
🧬 Cluster Details
- Gene Count: 13
- CAZyme Count: 4
- Substrate:
- Genome ID: Rep_1117
- Continent: NA
- Source Study: Leviatan et al., 2022 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | Rep_1117_c_4 | Rep_1117_c_4_81 | 93398 | 94450 | - | GT113 |
| pfam | Rep_1117_c_4 | Rep_1117_c_4_82 | 94461 | 95453 | - | Stealth_CR2 | Stealth_CR1 |
| STP | Rep_1117_c_4 | Rep_1117_c_4_83 | 95450 | 96550 | - | Pyr_redox |
| TC | Rep_1117_c_4 | Rep_1117_c_4_84 | 96561 | 97976 | - | 2.A.66.2.16 |
| NULL(UNKNOWN) | Rep_1117_c_4 | Rep_1117_c_4_85 | 98002 | 99138 | - |
NULL(UNKNOWN)
[View Structural Homologs] |
| CAZyme | Rep_1117_c_4 | Rep_1117_c_4_86 | 99172 | 100242 | - | GT2 |
| pfam | Rep_1117_c_4 | Rep_1117_c_4_87 | 100242 | 101207 | - | DUF6625 |
| pfam | Rep_1117_c_4 | Rep_1117_c_4_88 | 101204 | 101845 | - | DUF1919 |
| CAZyme | Rep_1117_c_4 | Rep_1117_c_4_89 | 101847 | 102995 | - | GT4 |
| CAZyme | Rep_1117_c_4 | Rep_1117_c_4_90 | 102998 | 104170 | - | GT4 |
| TC | Rep_1117_c_4 | Rep_1117_c_4_91 | 104203 | 105570 | - | 9.B.18.1.2 |
| TC | Rep_1117_c_4 | Rep_1117_c_4_92 | 105626 | 106363 | - | 8.A.3.2.3 |
| TC | Rep_1117_c_4 | Rep_1117_c_4_93 | 106373 | 107065 | - | 8.A.3.2.3 |
Gene ID: Rep_1117_c_4_81
Type: CAZyme
Location: 93398 - 94450 (-)
Type: CAZyme
Location: 93398 - 94450 (-)
Gene ID: Rep_1117_c_4_82
Type: pfam
Location: 94461 - 95453 (-)
Type: pfam
Location: 94461 - 95453 (-)
Gene ID: Rep_1117_c_4_83
Type: STP
Location: 95450 - 96550 (-)
Type: STP
Location: 95450 - 96550 (-)
Gene ID: Rep_1117_c_4_84
Type: TC
Location: 96561 - 97976 (-)
Type: TC
Location: 96561 - 97976 (-)
Gene ID: Rep_1117_c_4_85
Type:
Location: 98002 - 99138 (-)
Type:
Location: 98002 - 99138 (-)
Gene ID: Rep_1117_c_4_86
Type: CAZyme
Location: 99172 - 100242 (-)
Type: CAZyme
Location: 99172 - 100242 (-)
Gene ID: Rep_1117_c_4_87
Type: pfam
Location: 100242 - 101207 (-)
Type: pfam
Location: 100242 - 101207 (-)
Gene ID: Rep_1117_c_4_88
Type: pfam
Location: 101204 - 101845 (-)
Type: pfam
Location: 101204 - 101845 (-)
Gene ID: Rep_1117_c_4_89
Type: CAZyme
Location: 101847 - 102995 (-)
Type: CAZyme
Location: 101847 - 102995 (-)
Gene ID: Rep_1117_c_4_90
Type: CAZyme
Location: 102998 - 104170 (-)
Type: CAZyme
Location: 102998 - 104170 (-)
Gene ID: Rep_1117_c_4_91
Type: TC
Location: 104203 - 105570 (-)
Type: TC
Location: 104203 - 105570 (-)
Gene ID: Rep_1117_c_4_92
Type: TC
Location: 105626 - 106363 (-)
Type: TC
Location: 105626 - 106363 (-)
Gene ID: Rep_1117_c_4_93
Type: TC
Location: 106373 - 107065 (-)
Type: TC
Location: 106373 - 107065 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota
Class
Bacilli
Order
Lactobacillales
Family
Streptococcaceae
Genus
Streptococcus
Species
Streptococcus sp902463925
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.