Cluster: Rep_1117_CGC1
🧬 Cluster Details
- Gene Count: 7
- CAZyme Count: 1
- Substrate:
- Genome ID: Rep_1117
- Continent: NA
- Source Study: Leviatan et al., 2022 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | Rep_1117_c_0 | Rep_1117_c_0_202 | 245215 | 245754 | - | 3.A.1.25.5 |
| NULL(UNKNOWN) | Rep_1117_c_0 | Rep_1117_c_0_203 | 245849 | 246133 | - |
NULL(UNKNOWN)
[View Structural Homologs] |
| pfam | Rep_1117_c_0 | Rep_1117_c_0_204 | 246258 | 246470 | + | PC4 |
| TC | Rep_1117_c_0 | Rep_1117_c_0_205 | 246507 | 247841 | - | 2.A.55.2.6 |
| NULL(UNKNOWN) | Rep_1117_c_0 | Rep_1117_c_0_206 | 248576 | 248833 | - |
NULL(UNKNOWN)
[View Structural Homologs] |
| pfam | Rep_1117_c_0 | Rep_1117_c_0_207 | 248886 | 250376 | - | tRNA-synt_2 | tRNA_anti-codon | tRNA-synt_2d |
| CAZyme | Rep_1117_c_0 | Rep_1117_c_0_208 | 250603 | 251946 | + | CBM50 |
Gene ID: Rep_1117_c_0_202
Type: TC
Location: 245215 - 245754 (-)
Type: TC
Location: 245215 - 245754 (-)
Gene ID: Rep_1117_c_0_203
Type:
Location: 245849 - 246133 (-)
Type:
Location: 245849 - 246133 (-)
Gene ID: Rep_1117_c_0_204
Type: pfam
Location: 246258 - 246470 (+)
Type: pfam
Location: 246258 - 246470 (+)
Gene ID: Rep_1117_c_0_205
Type: TC
Location: 246507 - 247841 (-)
Type: TC
Location: 246507 - 247841 (-)
Gene ID: Rep_1117_c_0_206
Type:
Location: 248576 - 248833 (-)
Type:
Location: 248576 - 248833 (-)
Gene ID: Rep_1117_c_0_207
Type: pfam
Location: 248886 - 250376 (-)
Type: pfam
Location: 248886 - 250376 (-)
Gene ID: Rep_1117_c_0_208
Type: CAZyme
Location: 250603 - 251946 (+)
Type: CAZyme
Location: 250603 - 251946 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota
Class
Bacilli
Order
Lactobacillales
Family
Streptococcaceae
Genus
Streptococcus
Species
Streptococcus sp902463925
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.