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Cluster: Rep_1106_CGC6

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC Rep_1106_c_4 Rep_1106_c_4_130 135788 136684 - 3.A.1.130.1
pfam Rep_1106_c_4 Rep_1106_c_4_131 137119 138276 - AbiH
CAZyme Rep_1106_c_4 Rep_1106_c_4_132 138398 139489 - GH170
TC Rep_1106_c_4 Rep_1106_c_4_133 139675 140436 + 3.D.1.8.1
pfam Rep_1106_c_4 Rep_1106_c_4_134 140495 141667 - Fe-ADH | Fe-ADH_2 | ADH_Fe_C
pfam Rep_1106_c_4 Rep_1106_c_4_135 141958 142713 + adh_short | adh_short_C2
TC Rep_1106_c_4 Rep_1106_c_4_136 142987 144723 + 2.A.58.2.2
TC Rep_1106_c_4 Rep_1106_c_4_137 144825 145787 + 1.A.23.3.1
Gene ID: Rep_1106_c_4_130
Type: TC
Location: 135788 - 136684 (-)
Gene ID: Rep_1106_c_4_131
Type: pfam
Location: 137119 - 138276 (-)
Gene ID: Rep_1106_c_4_132
Type: CAZyme
Location: 138398 - 139489 (-)
Gene ID: Rep_1106_c_4_133
Type: TC
Location: 139675 - 140436 (+)
Gene ID: Rep_1106_c_4_134
Type: pfam
Location: 140495 - 141667 (-)
Gene ID: Rep_1106_c_4_135
Type: pfam
Location: 141958 - 142713 (+)
Gene ID: Rep_1106_c_4_136
Type: TC
Location: 142987 - 144723 (+)
Gene ID: Rep_1106_c_4_137
Type: TC
Location: 144825 - 145787 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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