dbCAN Logo

Cluster: Rep_1106_CGC45

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
CAZyme Rep_1106_c_18 Rep_1106_c_18_64 68024 69859 - GH154
NULL(UNKNOWN) Rep_1106_c_18 Rep_1106_c_18_65 69995 70828 + NULL(UNKNOWN)
[View Structural Homologs]
CAZyme Rep_1106_c_18 Rep_1106_c_18_66 70841 72466 + PL33_2
TF Rep_1106_c_18 Rep_1106_c_18_67 72504 73541 - LacI
NULL(UNKNOWN) Rep_1106_c_18 Rep_1106_c_18_68 73720 74106 + NULL(UNKNOWN)
[View Structural Homologs]
CAZyme Rep_1106_c_18 Rep_1106_c_18_69 74109 75908 + GH154
CAZyme Rep_1106_c_18 Rep_1106_c_18_70 75917 77062 + GH88
STP Rep_1106_c_18 Rep_1106_c_18_71 77110 78393 + SBP_bac_1
TC Rep_1106_c_18 Rep_1106_c_18_72 78619 79521 + 3.A.1.1.11
TC Rep_1106_c_18 Rep_1106_c_18_73 79534 80403 + 3.A.1.1.36
TC Rep_1106_c_18 Rep_1106_c_18_74 80421 80555 + 9.B.28.3.1
Gene ID: Rep_1106_c_18_64
Type: CAZyme
Location: 68024 - 69859 (-)
Gene ID: Rep_1106_c_18_65
Type:
Location: 69995 - 70828 (+)
Gene ID: Rep_1106_c_18_66
Type: CAZyme
Location: 70841 - 72466 (+)
Gene ID: Rep_1106_c_18_67
Type: TF
Location: 72504 - 73541 (-)
Gene ID: Rep_1106_c_18_68
Type:
Location: 73720 - 74106 (+)
Gene ID: Rep_1106_c_18_69
Type: CAZyme
Location: 74109 - 75908 (+)
Gene ID: Rep_1106_c_18_70
Type: CAZyme
Location: 75917 - 77062 (+)
Gene ID: Rep_1106_c_18_71
Type: STP
Location: 77110 - 78393 (+)
Gene ID: Rep_1106_c_18_72
Type: TC
Location: 78619 - 79521 (+)
Gene ID: Rep_1106_c_18_73
Type: TC
Location: 79534 - 80403 (+)
Gene ID: Rep_1106_c_18_74
Type: TC
Location: 80421 - 80555 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

Loading chart...

No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

← Back to Cluster List