Cluster: Rep_1106_CGC39
🧬 Cluster Details
- Gene Count: 7
- CAZyme Count: 3
- Substrate:
- Genome ID: Rep_1106
- Continent: NA
- Source Study: Leviatan et al., 2022 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | Rep_1106_c_17 | Rep_1106_c_17_40 | 45871 | 47616 | - | GH35 |
| CAZyme | Rep_1106_c_17 | Rep_1106_c_17_41 | 47650 | 49668 | - | GH42 |
| TF | Rep_1106_c_17 | Rep_1106_c_17_42 | 49822 | 50634 | + | HTH_AraC | HTH_AraC |
| CAZyme | Rep_1106_c_17 | Rep_1106_c_17_43 | 50718 | 52019 | - | GH28 |
| TC | Rep_1106_c_17 | Rep_1106_c_17_44 | 52045 | 53466 | - | 2.A.2.3.2 |
| TC | Rep_1106_c_17 | Rep_1106_c_17_45 | 53761 | 54708 | - | 3.A.1.14.15 |
| TC | Rep_1106_c_17 | Rep_1106_c_17_46 | 54729 | 55487 | - | 3.A.1.14.7 |
Gene ID: Rep_1106_c_17_40
Type: CAZyme
Location: 45871 - 47616 (-)
Type: CAZyme
Location: 45871 - 47616 (-)
Gene ID: Rep_1106_c_17_41
Type: CAZyme
Location: 47650 - 49668 (-)
Type: CAZyme
Location: 47650 - 49668 (-)
Gene ID: Rep_1106_c_17_42
Type: TF
Location: 49822 - 50634 (+)
Type: TF
Location: 49822 - 50634 (+)
Gene ID: Rep_1106_c_17_43
Type: CAZyme
Location: 50718 - 52019 (-)
Type: CAZyme
Location: 50718 - 52019 (-)
Gene ID: Rep_1106_c_17_44
Type: TC
Location: 52045 - 53466 (-)
Type: TC
Location: 52045 - 53466 (-)
Gene ID: Rep_1106_c_17_45
Type: TC
Location: 53761 - 54708 (-)
Type: TC
Location: 53761 - 54708 (-)
Gene ID: Rep_1106_c_17_46
Type: TC
Location: 54729 - 55487 (-)
Type: TC
Location: 54729 - 55487 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota
Class
Bacilli
Order
Lactobacillales
Family
Enterococcaceae
Genus
Enterococcus_C
Species
Enterococcus_C asini
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.