Cluster: Rep_1106_CGC38
🧬 Cluster Details
- Gene Count: 7
- CAZyme Count: 3
- Substrate:
- Genome ID: Rep_1106
- Continent: NA
- Source Study: Leviatan et al., 2022 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | Rep_1106_c_17 | Rep_1106_c_17_21 | 23738 | 25465 | - | 2.A.118.1.8 |
| TC | Rep_1106_c_17 | Rep_1106_c_17_22 | 25780 | 26766 | + | 2.A.16.6.1 |
| pfam | Rep_1106_c_17 | Rep_1106_c_17_23 | 26820 | 27677 | - | ROK |
| CAZyme | Rep_1106_c_17 | Rep_1106_c_17_24 | 27828 | 29405 | - | GH78 |
| TC | Rep_1106_c_17 | Rep_1106_c_17_25 | 29488 | 30711 | - | 2.A.1.68.1 |
| CAZyme | Rep_1106_c_17 | Rep_1106_c_17_26 | 30714 | 32978 | - | GH3 |
| CAZyme | Rep_1106_c_17 | Rep_1106_c_17_27 | 32980 | 34266 | - | GH43_35 |
Gene ID: Rep_1106_c_17_21
Type: TC
Location: 23738 - 25465 (-)
Type: TC
Location: 23738 - 25465 (-)
Gene ID: Rep_1106_c_17_22
Type: TC
Location: 25780 - 26766 (+)
Type: TC
Location: 25780 - 26766 (+)
Gene ID: Rep_1106_c_17_23
Type: pfam
Location: 26820 - 27677 (-)
Type: pfam
Location: 26820 - 27677 (-)
Gene ID: Rep_1106_c_17_24
Type: CAZyme
Location: 27828 - 29405 (-)
Type: CAZyme
Location: 27828 - 29405 (-)
Gene ID: Rep_1106_c_17_25
Type: TC
Location: 29488 - 30711 (-)
Type: TC
Location: 29488 - 30711 (-)
Gene ID: Rep_1106_c_17_26
Type: CAZyme
Location: 30714 - 32978 (-)
Type: CAZyme
Location: 30714 - 32978 (-)
Gene ID: Rep_1106_c_17_27
Type: CAZyme
Location: 32980 - 34266 (-)
Type: CAZyme
Location: 32980 - 34266 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota
Class
Bacilli
Order
Lactobacillales
Family
Enterococcaceae
Genus
Enterococcus_C
Species
Enterococcus_C asini
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.