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Cluster: Rep_1106_CGC35

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC Rep_1106_c_16 Rep_1106_c_16_334 364729 365433 + 3.A.1.132.6
NULL(UNKNOWN) Rep_1106_c_16 Rep_1106_c_16_335 365437 366180 + NULL(UNKNOWN)
[View Structural Homologs]
TC Rep_1106_c_16 Rep_1106_c_16_336 366173 367093 + 3.A.1.124.3
pfam Rep_1106_c_16 Rep_1106_c_16_337 367095 367892 + ABC2_membrane_2 | ABC2_membrane_4
pfam Rep_1106_c_16 Rep_1106_c_16_338 368029 368265 + UPF0154
TC Rep_1106_c_16 Rep_1106_c_16_339 368346 370097 + 3.A.1.106.8
TC Rep_1106_c_16 Rep_1106_c_16_340 370097 371878 + 3.A.1.106.8
pfam Rep_1106_c_16 Rep_1106_c_16_341 372315 373154 + PRD | PRD | CAT_RBD
TC Rep_1106_c_16 Rep_1106_c_16_342 373219 375117 + 4.A.1.2.6
TF Rep_1106_c_16 Rep_1106_c_16_343 375190 376104 - HTH_6
CAZyme Rep_1106_c_16 Rep_1106_c_16_344 376339 377727 + GH4
pfam Rep_1106_c_16 Rep_1106_c_16_345 377737 378564 + Hydrolase_3
CAZyme Rep_1106_c_16 Rep_1106_c_16_346 378592 380022 + GH1
CAZyme Rep_1106_c_16 Rep_1106_c_16_347 380086 381552 + GH1
TF Rep_1106_c_16 Rep_1106_c_16_348 381695 382408 + GntR
TC Rep_1106_c_16 Rep_1106_c_16_349 382451 383836 - 2.A.66.1.28
Gene ID: Rep_1106_c_16_334
Type: TC
Location: 364729 - 365433 (+)
Gene ID: Rep_1106_c_16_335
Type:
Location: 365437 - 366180 (+)
Gene ID: Rep_1106_c_16_336
Type: TC
Location: 366173 - 367093 (+)
Gene ID: Rep_1106_c_16_337
Type: pfam
Location: 367095 - 367892 (+)
Gene ID: Rep_1106_c_16_338
Type: pfam
Location: 368029 - 368265 (+)
Gene ID: Rep_1106_c_16_339
Type: TC
Location: 368346 - 370097 (+)
Gene ID: Rep_1106_c_16_340
Type: TC
Location: 370097 - 371878 (+)
Gene ID: Rep_1106_c_16_341
Type: pfam
Location: 372315 - 373154 (+)
Gene ID: Rep_1106_c_16_342
Type: TC
Location: 373219 - 375117 (+)
Gene ID: Rep_1106_c_16_343
Type: TF
Location: 375190 - 376104 (-)
Gene ID: Rep_1106_c_16_344
Type: CAZyme
Location: 376339 - 377727 (+)
Gene ID: Rep_1106_c_16_345
Type: pfam
Location: 377737 - 378564 (+)
Gene ID: Rep_1106_c_16_346
Type: CAZyme
Location: 378592 - 380022 (+)
Gene ID: Rep_1106_c_16_347
Type: CAZyme
Location: 380086 - 381552 (+)
Gene ID: Rep_1106_c_16_348
Type: TF
Location: 381695 - 382408 (+)
Gene ID: Rep_1106_c_16_349
Type: TC
Location: 382451 - 383836 (-)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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