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Cluster: Rep_1106_CGC32

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC Rep_1106_c_16 Rep_1106_c_16_171 193959 195374 + 3.A.5.1.1
NULL(UNKNOWN) Rep_1106_c_16 Rep_1106_c_16_172 195635 195898 + NULL(UNKNOWN)
[View Structural Homologs]
TC Rep_1106_c_16 Rep_1106_c_16_173 196175 197677 + 3.A.1.121.3
pfam Rep_1106_c_16 Rep_1106_c_16_174 197699 198217 + Acetyltransf_1 | Acetyltransf_3
pfam Rep_1106_c_16 Rep_1106_c_16_175 198249 198830 + Adenine_glyco
CAZyme Rep_1106_c_16 Rep_1106_c_16_176 199005 199937 + GH113
STP Rep_1106_c_16 Rep_1106_c_16_177 200091 201395 + SBP_bac_1
TC Rep_1106_c_16 Rep_1106_c_16_178 201573 202490 + 3.A.1.1.28
TC Rep_1106_c_16 Rep_1106_c_16_179 202494 203318 + 3.A.1.1.18
NULL(UNKNOWN) Rep_1106_c_16 Rep_1106_c_16_180 203349 203948 + NULL(UNKNOWN)
[View Structural Homologs]
CAZyme Rep_1106_c_16 Rep_1106_c_16_181 203935 206154 + GH36
TF Rep_1106_c_16 Rep_1106_c_16_182 206183 206896 + GntR
pfam Rep_1106_c_16 Rep_1106_c_16_183 206973 207854 + ROK
CAZyme Rep_1106_c_16 Rep_1106_c_16_184 207856 208830 + CE7
Gene ID: Rep_1106_c_16_171
Type: TC
Location: 193959 - 195374 (+)
Gene ID: Rep_1106_c_16_172
Type:
Location: 195635 - 195898 (+)
Gene ID: Rep_1106_c_16_173
Type: TC
Location: 196175 - 197677 (+)
Gene ID: Rep_1106_c_16_174
Type: pfam
Location: 197699 - 198217 (+)
Gene ID: Rep_1106_c_16_175
Type: pfam
Location: 198249 - 198830 (+)
Gene ID: Rep_1106_c_16_176
Type: CAZyme
Location: 199005 - 199937 (+)
Gene ID: Rep_1106_c_16_177
Type: STP
Location: 200091 - 201395 (+)
Gene ID: Rep_1106_c_16_178
Type: TC
Location: 201573 - 202490 (+)
Gene ID: Rep_1106_c_16_179
Type: TC
Location: 202494 - 203318 (+)
Gene ID: Rep_1106_c_16_180
Type:
Location: 203349 - 203948 (+)
Gene ID: Rep_1106_c_16_181
Type: CAZyme
Location: 203935 - 206154 (+)
Gene ID: Rep_1106_c_16_182
Type: TF
Location: 206183 - 206896 (+)
Gene ID: Rep_1106_c_16_183
Type: pfam
Location: 206973 - 207854 (+)
Gene ID: Rep_1106_c_16_184
Type: CAZyme
Location: 207856 - 208830 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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