Cluster: Rep_1106_CGC2
🧬 Cluster Details
- Gene Count: 12
- CAZyme Count: 4
- Substrate:
- Genome ID: Rep_1106
- CGC Family ID: CGCFAM_00456
- Continent: NA
- Source Study: Leviatan et al., 2022 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | Rep_1106_c_0 | Rep_1106_c_0_43 | 38560 | 39342 | + | 8.A.3.2.4 |
| TC | Rep_1106_c_0 | Rep_1106_c_0_44 | 39354 | 40067 | + | 8.A.3.2.1 |
| pfam | Rep_1106_c_0 | Rep_1106_c_0_45 | 40105 | 40869 | + | CpsB_CapC |
| pfam | Rep_1106_c_0 | Rep_1106_c_0_46 | 40884 | 41831 | + | 3Beta_HSD | Epimerase | Polysacc_synt_2 | RmlD_sub_bind | NAD_binding_4 | KR | NAD_binding_10 | GDP_Man_Dehyd |
| TC | Rep_1106_c_0 | Rep_1106_c_0_47 | 41836 | 42477 | + | 9.B.18.1.3 |
| CAZyme | Rep_1106_c_0 | Rep_1106_c_0_48 | 42509 | 43330 | + | GT2 |
| pfam | Rep_1106_c_0 | Rep_1106_c_0_49 | 43354 | 44352 | + | Stealth_CR2 | Stealth_CR1 |
| CAZyme | Rep_1106_c_0 | Rep_1106_c_0_50 | 44342 | 45487 | + | GT4 |
| NULL(UNKNOWN) | Rep_1106_c_0 | Rep_1106_c_0_51 | 45492 | 46688 | + |
NULL(UNKNOWN)
[View Structural Homologs] |
| CAZyme | Rep_1106_c_0 | Rep_1106_c_0_52 | 46730 | 47671 | + | GT2 |
| CAZyme | Rep_1106_c_0 | Rep_1106_c_0_53 | 47744 | 48724 | + | GT2 |
| TC | Rep_1106_c_0 | Rep_1106_c_0_54 | 48810 | 50252 | + | 2.A.66.2.16 |
Gene ID: Rep_1106_c_0_43
Type: TC
Location: 38560 - 39342 (+)
Type: TC
Location: 38560 - 39342 (+)
Gene ID: Rep_1106_c_0_44
Type: TC
Location: 39354 - 40067 (+)
Type: TC
Location: 39354 - 40067 (+)
Gene ID: Rep_1106_c_0_45
Type: pfam
Location: 40105 - 40869 (+)
Type: pfam
Location: 40105 - 40869 (+)
Gene ID: Rep_1106_c_0_46
Type: pfam
Location: 40884 - 41831 (+)
Type: pfam
Location: 40884 - 41831 (+)
Gene ID: Rep_1106_c_0_47
Type: TC
Location: 41836 - 42477 (+)
Type: TC
Location: 41836 - 42477 (+)
Gene ID: Rep_1106_c_0_48
Type: CAZyme
Location: 42509 - 43330 (+)
Type: CAZyme
Location: 42509 - 43330 (+)
Gene ID: Rep_1106_c_0_49
Type: pfam
Location: 43354 - 44352 (+)
Type: pfam
Location: 43354 - 44352 (+)
Gene ID: Rep_1106_c_0_50
Type: CAZyme
Location: 44342 - 45487 (+)
Type: CAZyme
Location: 44342 - 45487 (+)
Gene ID: Rep_1106_c_0_51
Type:
Location: 45492 - 46688 (+)
Type:
Location: 45492 - 46688 (+)
Gene ID: Rep_1106_c_0_52
Type: CAZyme
Location: 46730 - 47671 (+)
Type: CAZyme
Location: 46730 - 47671 (+)
Gene ID: Rep_1106_c_0_53
Type: CAZyme
Location: 47744 - 48724 (+)
Type: CAZyme
Location: 47744 - 48724 (+)
Gene ID: Rep_1106_c_0_54
Type: TC
Location: 48810 - 50252 (+)
Type: TC
Location: 48810 - 50252 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota
Class
Bacilli
Order
Lactobacillales
Family
Enterococcaceae
Genus
Enterococcus_C
Species
Enterococcus_C asini
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.