Cluster: Rep_1106_CGC19
🧬 Cluster Details
- Gene Count: 7
- CAZyme Count: 2
- Substrate:
- Genome ID: Rep_1106
- CGC Family ID: CGCFAM_03279
- Continent: NA
- Source Study: Leviatan et al., 2022 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | Rep_1106_c_10 | Rep_1106_c_10_183 | 197519 | 198124 | - | 9.B.28.1.3 |
| TC | Rep_1106_c_10 | Rep_1106_c_10_184 | 198184 | 199818 | - | 3.A.1.1.29 |
| TC | Rep_1106_c_10 | Rep_1106_c_10_185 | 199830 | 200744 | - | 3.A.1.1.29 |
| TC | Rep_1106_c_10 | Rep_1106_c_10_186 | 200764 | 201714 | - | 3.A.1.1.29 |
| TF | Rep_1106_c_10 | Rep_1106_c_10_187 | 201730 | 202737 | - | LacI |
| CAZyme | Rep_1106_c_10 | Rep_1106_c_10_188 | 202917 | 205043 | - | GH3 |
| CAZyme | Rep_1106_c_10 | Rep_1106_c_10_189 | 205045 | 206481 | - | GH1 |
Gene ID: Rep_1106_c_10_183
Type: TC
Location: 197519 - 198124 (-)
Type: TC
Location: 197519 - 198124 (-)
Gene ID: Rep_1106_c_10_184
Type: TC
Location: 198184 - 199818 (-)
Type: TC
Location: 198184 - 199818 (-)
Gene ID: Rep_1106_c_10_185
Type: TC
Location: 199830 - 200744 (-)
Type: TC
Location: 199830 - 200744 (-)
Gene ID: Rep_1106_c_10_186
Type: TC
Location: 200764 - 201714 (-)
Type: TC
Location: 200764 - 201714 (-)
Gene ID: Rep_1106_c_10_187
Type: TF
Location: 201730 - 202737 (-)
Type: TF
Location: 201730 - 202737 (-)
Gene ID: Rep_1106_c_10_188
Type: CAZyme
Location: 202917 - 205043 (-)
Type: CAZyme
Location: 202917 - 205043 (-)
Gene ID: Rep_1106_c_10_189
Type: CAZyme
Location: 205045 - 206481 (-)
Type: CAZyme
Location: 205045 - 206481 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota
Class
Bacilli
Order
Lactobacillales
Family
Enterococcaceae
Genus
Enterococcus_C
Species
Enterococcus_C asini
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.