Cluster: Rep_1106_CGC15
🧬 Cluster Details
- Gene Count: 12
- CAZyme Count: 3
- Substrate:
- Genome ID: Rep_1106
- CGC Family ID: CGCFAM_09176
- Continent: NA
- Source Study: Leviatan et al., 2022 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | Rep_1106_c_10 | Rep_1106_c_10_94 | 98901 | 100091 | + | 2.A.49.9.3 |
| pfam | Rep_1106_c_10 | Rep_1106_c_10_95 | 100145 | 100708 | - | EFP | EFP_N | Elong-fact-P_C |
| pfam | Rep_1106_c_10 | Rep_1106_c_10_96 | 100825 | 101760 | - | Cation_efflux |
| CAZyme | Rep_1106_c_10 | Rep_1106_c_10_97 | 101877 | 103511 | - | GH13_31 |
| CAZyme | Rep_1106_c_10 | Rep_1106_c_10_98 | 103508 | 105139 | - | GH13_31 |
| CAZyme | Rep_1106_c_10 | Rep_1106_c_10_99 | 105171 | 106952 | - | CBM34 | GH13_20 |
| TC | Rep_1106_c_10 | Rep_1106_c_10_100 | 107334 | 108593 | + | 3.A.1.1.27 |
| TC | Rep_1106_c_10 | Rep_1106_c_10_101 | 108666 | 110012 | + | 3.A.1.1.27 |
| TC | Rep_1106_c_10 | Rep_1106_c_10_102 | 110015 | 110884 | + | 3.A.1.1.27 |
| peptidase | Rep_1106_c_10 | Rep_1106_c_10_103 | 111367 | 112245 | - | S33.UPW |
| TC | Rep_1106_c_10 | Rep_1106_c_10_104 | 112441 | 114012 | + | 2.A.55.2.6 |
| TC | Rep_1106_c_10 | Rep_1106_c_10_105 | 114142 | 115311 | + | 2.A.86.1.11 |
Gene ID: Rep_1106_c_10_94
Type: TC
Location: 98901 - 100091 (+)
Type: TC
Location: 98901 - 100091 (+)
Gene ID: Rep_1106_c_10_95
Type: pfam
Location: 100145 - 100708 (-)
Type: pfam
Location: 100145 - 100708 (-)
Gene ID: Rep_1106_c_10_96
Type: pfam
Location: 100825 - 101760 (-)
Type: pfam
Location: 100825 - 101760 (-)
Gene ID: Rep_1106_c_10_97
Type: CAZyme
Location: 101877 - 103511 (-)
Type: CAZyme
Location: 101877 - 103511 (-)
Gene ID: Rep_1106_c_10_98
Type: CAZyme
Location: 103508 - 105139 (-)
Type: CAZyme
Location: 103508 - 105139 (-)
Gene ID: Rep_1106_c_10_99
Type: CAZyme
Location: 105171 - 106952 (-)
Type: CAZyme
Location: 105171 - 106952 (-)
Gene ID: Rep_1106_c_10_100
Type: TC
Location: 107334 - 108593 (+)
Type: TC
Location: 107334 - 108593 (+)
Gene ID: Rep_1106_c_10_101
Type: TC
Location: 108666 - 110012 (+)
Type: TC
Location: 108666 - 110012 (+)
Gene ID: Rep_1106_c_10_102
Type: TC
Location: 110015 - 110884 (+)
Type: TC
Location: 110015 - 110884 (+)
Gene ID: Rep_1106_c_10_103
Type: peptidase
Location: 111367 - 112245 (-)
Type: peptidase
Location: 111367 - 112245 (-)
Gene ID: Rep_1106_c_10_104
Type: TC
Location: 112441 - 114012 (+)
Type: TC
Location: 112441 - 114012 (+)
Gene ID: Rep_1106_c_10_105
Type: TC
Location: 114142 - 115311 (+)
Type: TC
Location: 114142 - 115311 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota
Class
Bacilli
Order
Lactobacillales
Family
Enterococcaceae
Genus
Enterococcus_C
Species
Enterococcus_C asini
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.