Cluster: Rep_1106_CGC1
🧬 Cluster Details
- Gene Count: 6
- CAZyme Count: 2
- Substrate:
- Genome ID: Rep_1106
- CGC Family ID: CGCFAM_01400
- Continent: NA
- Source Study: Leviatan et al., 2022 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | Rep_1106_c_0 | Rep_1106_c_0_16 | 12365 | 13516 | + | GH88 |
| CAZyme | Rep_1106_c_0 | Rep_1106_c_0_17 | 13528 | 15303 | + | GH35 |
| TF | Rep_1106_c_0 | Rep_1106_c_0_18 | 15322 | 16029 | - | GntR |
| TC | Rep_1106_c_0 | Rep_1106_c_0_19 | 16251 | 17189 | + | 4.A.6.1.15 |
| TC | Rep_1106_c_0 | Rep_1106_c_0_20 | 17206 | 18009 | + | 4.A.6.1.13 |
| TC | Rep_1106_c_0 | Rep_1106_c_0_21 | 17996 | 18802 | + | 4.A.6.1.13 |
Gene ID: Rep_1106_c_0_16
Type: CAZyme
Location: 12365 - 13516 (+)
Type: CAZyme
Location: 12365 - 13516 (+)
Gene ID: Rep_1106_c_0_17
Type: CAZyme
Location: 13528 - 15303 (+)
Type: CAZyme
Location: 13528 - 15303 (+)
Gene ID: Rep_1106_c_0_18
Type: TF
Location: 15322 - 16029 (-)
Type: TF
Location: 15322 - 16029 (-)
Gene ID: Rep_1106_c_0_19
Type: TC
Location: 16251 - 17189 (+)
Type: TC
Location: 16251 - 17189 (+)
Gene ID: Rep_1106_c_0_20
Type: TC
Location: 17206 - 18009 (+)
Type: TC
Location: 17206 - 18009 (+)
Gene ID: Rep_1106_c_0_21
Type: TC
Location: 17996 - 18802 (+)
Type: TC
Location: 17996 - 18802 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota
Class
Bacilli
Order
Lactobacillales
Family
Enterococcaceae
Genus
Enterococcus_C
Species
Enterococcus_C asini
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.