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Cluster: Rep_1102_CGC58

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC Rep_1102_c_43 Rep_1102_c_43_7 9052 9687 - 9.B.27.2.3
TF Rep_1102_c_43 Rep_1102_c_43_8 9829 10680 + HTH_6
pfam Rep_1102_c_43 Rep_1102_c_43_9 10722 11039 - DUF1905
TC Rep_1102_c_43 Rep_1102_c_43_10 11154 13109 - 4.A.1.2.11
STP Rep_1102_c_43 Rep_1102_c_43_11 13122 14012 - SIS
CAZyme Rep_1102_c_43 Rep_1102_c_43_12 14009 15064 - GH170
pfam Rep_1102_c_43 Rep_1102_c_43_13 15340 16281 + NAD_Gly3P_dh_N | ApbA | NAD_binding_2 | ApbA_C
pfam Rep_1102_c_43 Rep_1102_c_43_14 16322 16564 - Transgly_assoc
TC Rep_1102_c_43 Rep_1102_c_43_15 17020 18354 + 2.A.3.1.22
TF Rep_1102_c_43 Rep_1102_c_43_16 18480 18677 + HTH_3
NULL(UNKNOWN) Rep_1102_c_43 Rep_1102_c_43_17 18679 19107 + NULL(UNKNOWN)
[View Structural Homologs]
TC Rep_1102_c_43 Rep_1102_c_43_18 19177 19836 - 1.A.8.13.3
Gene ID: Rep_1102_c_43_7
Type: TC
Location: 9052 - 9687 (-)
Gene ID: Rep_1102_c_43_8
Type: TF
Location: 9829 - 10680 (+)
Gene ID: Rep_1102_c_43_9
Type: pfam
Location: 10722 - 11039 (-)
Gene ID: Rep_1102_c_43_10
Type: TC
Location: 11154 - 13109 (-)
Gene ID: Rep_1102_c_43_11
Type: STP
Location: 13122 - 14012 (-)
Gene ID: Rep_1102_c_43_12
Type: CAZyme
Location: 14009 - 15064 (-)
Gene ID: Rep_1102_c_43_13
Type: pfam
Location: 15340 - 16281 (+)
Gene ID: Rep_1102_c_43_14
Type: pfam
Location: 16322 - 16564 (-)
Gene ID: Rep_1102_c_43_15
Type: TC
Location: 17020 - 18354 (+)
Gene ID: Rep_1102_c_43_16
Type: TF
Location: 18480 - 18677 (+)
Gene ID: Rep_1102_c_43_17
Type:
Location: 18679 - 19107 (+)
Gene ID: Rep_1102_c_43_18
Type: TC
Location: 19177 - 19836 (-)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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