Cluster: Rep_1102_CGC55
🧬 Cluster Details
- Gene Count: 5
- CAZyme Count: 1
- Substrate:
- Genome ID: Rep_1102
- Continent: NA
- Source Study: Leviatan et al., 2022 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | Rep_1102_c_36 | Rep_1102_c_36_20 | 17972 | 18271 | + | 2.A.53.3.4 |
| pfam | Rep_1102_c_36 | Rep_1102_c_36_21 | 18431 | 19108 | + | DeoC |
| TC | Rep_1102_c_36 | Rep_1102_c_36_22 | 19113 | 19559 | + | 4.A.2.1.14 |
| TC | Rep_1102_c_36 | Rep_1102_c_36_23 | 19575 | 20951 | + | 4.A.2.1.1 |
| CAZyme | Rep_1102_c_36 | Rep_1102_c_36_24 | 20960 | 21982 | + | GH177 |
Gene ID: Rep_1102_c_36_20
Type: TC
Location: 17972 - 18271 (+)
Type: TC
Location: 17972 - 18271 (+)
Gene ID: Rep_1102_c_36_21
Type: pfam
Location: 18431 - 19108 (+)
Type: pfam
Location: 18431 - 19108 (+)
Gene ID: Rep_1102_c_36_22
Type: TC
Location: 19113 - 19559 (+)
Type: TC
Location: 19113 - 19559 (+)
Gene ID: Rep_1102_c_36_23
Type: TC
Location: 19575 - 20951 (+)
Type: TC
Location: 19575 - 20951 (+)
Gene ID: Rep_1102_c_36_24
Type: CAZyme
Location: 20960 - 21982 (+)
Type: CAZyme
Location: 20960 - 21982 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota
Class
Bacilli
Order
Lactobacillales
Family
Enterococcaceae
Genus
Enterococcus_A
Species
Enterococcus_A raffinosus
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.